Gene: AT5G62150
Gene description
TAIR ID: AT5G62150
Short description: peptidoglycan-binding LysM domain-containing protein
Pathogen responsiveness: 2.43
General responsiveness: 0.95
GO biological process
cell wall macromolecule catabolic process
GO cellular component
mitochondrion
GO molecular function
molecular_function
Protein domain
No domain annotation
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
83 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE11807 | Col, ERF104 ox, water 4 h | Col, ERF104 ox, Flg22 4 h | 3.15 | 3.26E-03 |
| GSE11807 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 1.96 | 3.59E-02 |
| GSE12856 | Col, WT, control | Col, WT, Bg h | 2.12 | 5.91E-08 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 2.89 | 2.78E-09 |
| GSE13739 | Col, WT, control 0 h | Col, WT, G.orontii 5 d | 1.57 | 3.27E-07 |
| GSE13739 | Col, WT, control 7 d | Col, WT, G.orontii 7 d | 2.58 | 8.80E-14 |
| GSE13739 | Col, eds, control 7 d | Col, eds, G.orontii 7 d | 2.20 | 2.02E-11 |
| GSE16472 | Col, WT, Flg22 0 min | Col, WT, Flg22 30 min | 6.35 | 8.59E-03 |
| GSE16472 | Col, WT, Flg22 0 min | Col, WT, Flg22 60min | 5.40 | 1.36E-02 |
| GSE17382 | Col, WT, Flg22 0 min | Col, WT, Flg22 60min | 3.80 | 3.65E-02 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 1 h | 3.19 | 2.57E-03 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 2 h | 2.77 | 6.14E-03 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | 4.86 | 7.76E-07 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | 3.91 | 5.46E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 4.22 | 1.08E-05 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | 4.00 | 3.67E-05 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 3.43 | 4.37E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 3.97 | 6.34E-06 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 3.62 | 2.29E-05 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_1, Hpa noco2 96 h | 1.63 | 2.12E-09 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_2, Hpa noco2 96 h | 1.98 | 1.25E-10 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 5.51 | 3.13E-10 |
| GSE20278 | Col, RPL18-HF, control, polysomal RNA | Col, RPL18-HF, TuMV 10 d, polysomal RNA | 1.62 | 2.44E-02 |
| GSE2169 | Col, WT, water | Col, WT, chitin 30 min | 1.66 | 4.65E-05 |
| GSE2169 | Col, rre1, water | Col, rre1, chitin 30 min | 2.42 | 1.61E-07 |
| GSE2169 | Col, rre2, water | Col, rre2, chitin 30 min | 2.41 | 1.59E-07 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 2.31 | 2.47E-09 |
| GSE2538 | Col, WT, control | Col, WT, crab shell chitin 30 min | 3.88 | 1.79E-07 |
| GSE2538 | Col, WT, control | Col, WT, purified chitin octamer 30 min | 3.27 | 6.25E-07 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | 1.63 | 3.32E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 1.55 | 1.85E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 2.49 | 4.97E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 4.21 | 1.56E-14 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 3.13 | 1.22E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 5.18 | 1.26E-15 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.83 | 7.05E-14 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 4.87 | 2.19E-15 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 3.50 | 1.24E-09 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.70 | 2.49E-05 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 3.42 | 8.31E-10 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 2.79 | 4.82E-08 |
| GSE4746 | Col, WT, water 30 min | Col, WT, chitooctaose 30 min | 2.54 | 2.42E-04 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 3.16 | 3.07E-03 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 6.16 | 1.07E-06 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 3.08 | 5.89E-11 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 3.26 | 2.44E-11 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 3.75 | 2.20E-06 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 2.85 | 1.69E-04 |
| GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_0157_H7 7 h | 1.89 | 2.06E-02 |
| GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_TUV86 flic- 7 h | 2.16 | 4.38E-03 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 3.10 | 1.20E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, hrpA- 10 h | 1.84 | 1.69E-02 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 4.54 | 6.28E-21 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 2.54 | 2.40E-08 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 3.29 | 3.04E-13 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 2.58 | 1.02E-08 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 3.83 | 3.69E-16 |
| GSE56094 | Col, WT, control 12 h | Col, WT, hrpA- 12 h | 2.09 | 8.61E-06 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 3.98 | 1.68E-17 |
| GSE56094 | Col, WT, control 13 h | Col, WT, hrpA- 13 h | 1.79 | 8.90E-05 |
| GSE56094 | Col, WT, control 3 h | Col, WT, hrpA- 3 h | 1.69 | 2.80E-04 |
| GSE56094 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 2.24 | 1.18E-06 |
| GSE56094 | Col, WT, control 4 h | Col, WT, hrpA- 4 h | 1.67 | 1.18E-03 |
| GSE56094 | Col, WT, control 5 h | Col, WT, PstDC3000 5 h | 1.54 | 9.83E-04 |
| GSE56094 | Col, WT, control 5 h | Col, WT, hrpA- 5 h | 1.61 | 6.32E-04 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | 2.08 | 3.43E-06 |
| GSE56094 | Col, WT, control 6 h | Col, WT, hrpA- 6 h | 2.18 | 2.87E-06 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 2.30 | 3.14E-07 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 2.53 | 6.01E-08 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 2.92 | 4.60E-11 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 2.33 | 1.92E-07 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 3.45 | 9.01E-14 |
| GSE56094 | Col, WT, control 9 h | Col, WT, hrpA- 9 h | 2.50 | 4.54E-08 |
| GSE5615 | Col, WT, GST 1 h | Col, WT, GST+NPP1 1 h | 2.19 | 5.87E-05 |
| GSE5615 | Col, WT, GST 4 h | Col, WT, GST+NPP1 4 h | 2.67 | 4.05E-07 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 2.71 | 7.77E-08 |
| GSE5616 | Col, WT, water 6 h | Col, WT, P. infestans 6 h | 2.23 | 5.01E-08 |
| GSE5686 | Col, WT, control 5 d | Col, WT, G.orontii 5 d | 1.53 | 8.97E-09 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 HrpA- 12 h | 2.10 | 1.70E-04 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 3.40 | 1.84E-07 |
| GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 AvrRpm1 4 h | 2.64 | 4.12E-05 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 2.43 | 3.90E-06 |
| GSE8319 | Col, WT, control | Col, WT, chitooctaose 30 min | 3.02 | 1.98E-11 |
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