Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018063: cytochrome c-heme linkage0.00E+00
2GO:0010398: xylogalacturonan metabolic process0.00E+00
3GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0006216: cytidine catabolic process0.00E+00
6GO:0046686: response to cadmium ion1.73E-06
7GO:0000162: tryptophan biosynthetic process1.98E-06
8GO:0009407: toxin catabolic process4.40E-06
9GO:0055114: oxidation-reduction process3.35E-05
10GO:0051607: defense response to virus3.46E-05
11GO:0006979: response to oxidative stress6.34E-05
12GO:0006564: L-serine biosynthetic process7.32E-05
13GO:0010150: leaf senescence1.79E-04
14GO:0071669: plant-type cell wall organization or biogenesis1.93E-04
15GO:1900056: negative regulation of leaf senescence1.93E-04
16GO:0009636: response to toxic substance1.94E-04
17GO:0009651: response to salt stress2.21E-04
18GO:0009617: response to bacterium2.53E-04
19GO:0010230: alternative respiration2.60E-04
20GO:0006680: glucosylceramide catabolic process2.60E-04
21GO:0042964: thioredoxin reduction2.60E-04
22GO:0019567: arabinose biosynthetic process2.60E-04
23GO:0009851: auxin biosynthetic process2.70E-04
24GO:0010112: regulation of systemic acquired resistance3.65E-04
25GO:0015865: purine nucleotide transport5.74E-04
26GO:1902000: homogentisate catabolic process5.74E-04
27GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine5.74E-04
28GO:0071497: cellular response to freezing5.74E-04
29GO:0051252: regulation of RNA metabolic process5.74E-04
30GO:0006672: ceramide metabolic process5.74E-04
31GO:0019632: shikimate metabolic process5.74E-04
32GO:0052544: defense response by callose deposition in cell wall5.84E-04
33GO:0006591: ornithine metabolic process9.31E-04
34GO:0061158: 3'-UTR-mediated mRNA destabilization9.31E-04
35GO:0002230: positive regulation of defense response to virus by host9.31E-04
36GO:0006556: S-adenosylmethionine biosynthetic process9.31E-04
37GO:0072661: protein targeting to plasma membrane9.31E-04
38GO:0006065: UDP-glucuronate biosynthetic process9.31E-04
39GO:0010476: gibberellin mediated signaling pathway9.31E-04
40GO:0010325: raffinose family oligosaccharide biosynthetic process9.31E-04
41GO:0010272: response to silver ion9.31E-04
42GO:0009072: aromatic amino acid family metabolic process9.31E-04
43GO:0052546: cell wall pectin metabolic process9.31E-04
44GO:0006874: cellular calcium ion homeostasis1.28E-03
45GO:1902290: positive regulation of defense response to oomycetes1.33E-03
46GO:0080024: indolebutyric acid metabolic process1.33E-03
47GO:0070301: cellular response to hydrogen peroxide1.33E-03
48GO:0046902: regulation of mitochondrial membrane permeability1.33E-03
49GO:0006012: galactose metabolic process1.68E-03
50GO:0033356: UDP-L-arabinose metabolic process1.78E-03
51GO:0015867: ATP transport1.78E-03
52GO:0010188: response to microbial phytotoxin1.78E-03
53GO:0045227: capsule polysaccharide biosynthetic process1.78E-03
54GO:0009939: positive regulation of gibberellic acid mediated signaling pathway1.78E-03
55GO:0048830: adventitious root development1.78E-03
56GO:0033358: UDP-L-arabinose biosynthetic process1.78E-03
57GO:1901002: positive regulation of response to salt stress1.78E-03
58GO:0010600: regulation of auxin biosynthetic process1.78E-03
59GO:0046283: anthocyanin-containing compound metabolic process2.27E-03
60GO:0048544: recognition of pollen2.47E-03
61GO:0009228: thiamine biosynthetic process2.80E-03
62GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione2.80E-03
63GO:0002238: response to molecule of fungal origin2.80E-03
64GO:0009972: cytidine deamination2.80E-03
65GO:0009759: indole glucosinolate biosynthetic process2.80E-03
66GO:0006561: proline biosynthetic process2.80E-03
67GO:0015866: ADP transport2.80E-03
68GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.80E-03
69GO:0010256: endomembrane system organization2.80E-03
70GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.80E-03
71GO:0009082: branched-chain amino acid biosynthetic process3.36E-03
72GO:0009423: chorismate biosynthetic process3.36E-03
73GO:0009099: valine biosynthetic process3.36E-03
74GO:0048444: floral organ morphogenesis3.36E-03
75GO:0042742: defense response to bacterium3.43E-03
76GO:0009611: response to wounding3.43E-03
77GO:0045454: cell redox homeostasis3.76E-03
78GO:0050832: defense response to fungus3.91E-03
79GO:0006886: intracellular protein transport3.95E-03
80GO:1900057: positive regulation of leaf senescence3.97E-03
81GO:0050829: defense response to Gram-negative bacterium3.97E-03
82GO:0080186: developmental vegetative growth3.97E-03
83GO:0009615: response to virus4.08E-03
84GO:0042744: hydrogen peroxide catabolic process4.45E-03
85GO:0009627: systemic acquired resistance4.56E-03
86GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.60E-03
87GO:0009819: drought recovery4.60E-03
88GO:0043068: positive regulation of programmed cell death4.60E-03
89GO:0006605: protein targeting4.60E-03
90GO:0006102: isocitrate metabolic process4.60E-03
91GO:0009751: response to salicylic acid5.07E-03
92GO:0010120: camalexin biosynthetic process5.27E-03
93GO:0010497: plasmodesmata-mediated intercellular transport5.27E-03
94GO:0009097: isoleucine biosynthetic process5.27E-03
95GO:0017004: cytochrome complex assembly5.27E-03
96GO:0019430: removal of superoxide radicals5.27E-03
97GO:0007186: G-protein coupled receptor signaling pathway5.27E-03
98GO:0009753: response to jasmonic acid5.76E-03
99GO:0009056: catabolic process5.98E-03
100GO:0046685: response to arsenic-containing substance5.98E-03
101GO:0051865: protein autoubiquitination5.98E-03
102GO:0010043: response to zinc ion6.15E-03
103GO:1900426: positive regulation of defense response to bacterium6.71E-03
104GO:0043067: regulation of programmed cell death6.71E-03
105GO:0009098: leucine biosynthetic process6.71E-03
106GO:2000280: regulation of root development6.71E-03
107GO:0006099: tricarboxylic acid cycle7.05E-03
108GO:0006032: chitin catabolic process7.47E-03
109GO:0009688: abscisic acid biosynthetic process7.47E-03
110GO:0009641: shade avoidance7.47E-03
111GO:0006839: mitochondrial transport7.69E-03
112GO:0009682: induced systemic resistance8.27E-03
113GO:0009073: aromatic amino acid family biosynthetic process8.27E-03
114GO:0006415: translational termination8.27E-03
115GO:0000272: polysaccharide catabolic process8.27E-03
116GO:0009684: indoleacetic acid biosynthetic process8.27E-03
117GO:0042542: response to hydrogen peroxide8.36E-03
118GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.09E-03
119GO:0071365: cellular response to auxin stimulus9.09E-03
120GO:0012501: programmed cell death9.09E-03
121GO:0010102: lateral root morphogenesis9.94E-03
122GO:0006807: nitrogen compound metabolic process9.94E-03
123GO:2000028: regulation of photoperiodism, flowering9.94E-03
124GO:0009718: anthocyanin-containing compound biosynthetic process9.94E-03
125GO:0090351: seedling development1.17E-02
126GO:0009225: nucleotide-sugar metabolic process1.17E-02
127GO:0080147: root hair cell development1.36E-02
128GO:0005992: trehalose biosynthetic process1.36E-02
129GO:0016192: vesicle-mediated transport1.39E-02
130GO:0051302: regulation of cell division1.46E-02
131GO:0009620: response to fungus1.53E-02
132GO:0016998: cell wall macromolecule catabolic process1.56E-02
133GO:0048511: rhythmic process1.56E-02
134GO:0030433: ubiquitin-dependent ERAD pathway1.67E-02
135GO:0006730: one-carbon metabolic process1.67E-02
136GO:0071456: cellular response to hypoxia1.67E-02
137GO:0030245: cellulose catabolic process1.67E-02
138GO:0010227: floral organ abscission1.77E-02
139GO:0009693: ethylene biosynthetic process1.77E-02
140GO:0009409: response to cold1.90E-02
141GO:0042147: retrograde transport, endosome to Golgi1.99E-02
142GO:0042631: cellular response to water deprivation2.11E-02
143GO:0006662: glycerol ether metabolic process2.22E-02
144GO:0009058: biosynthetic process2.22E-02
145GO:0006520: cellular amino acid metabolic process2.22E-02
146GO:0045489: pectin biosynthetic process2.22E-02
147GO:0005975: carbohydrate metabolic process2.31E-02
148GO:0006814: sodium ion transport2.34E-02
149GO:0008152: metabolic process2.41E-02
150GO:0006623: protein targeting to vacuole2.46E-02
151GO:0010183: pollen tube guidance2.46E-02
152GO:0000302: response to reactive oxygen species2.58E-02
153GO:0006891: intra-Golgi vesicle-mediated transport2.58E-02
154GO:0010193: response to ozone2.58E-02
155GO:0006635: fatty acid beta-oxidation2.58E-02
156GO:0009630: gravitropism2.70E-02
157GO:0040008: regulation of growth2.77E-02
158GO:0071281: cellular response to iron ion2.83E-02
159GO:1901657: glycosyl compound metabolic process2.83E-02
160GO:0045490: pectin catabolic process2.90E-02
161GO:0006464: cellular protein modification process2.96E-02
162GO:0019760: glucosinolate metabolic process2.96E-02
163GO:0009414: response to water deprivation3.40E-02
164GO:0009816: defense response to bacterium, incompatible interaction3.49E-02
165GO:0006906: vesicle fusion3.63E-02
166GO:0006974: cellular response to DNA damage stimulus3.63E-02
167GO:0016049: cell growth3.91E-02
168GO:0030244: cellulose biosynthetic process4.05E-02
169GO:0008219: cell death4.05E-02
170GO:0009817: defense response to fungus, incompatible interaction4.05E-02
171GO:0009832: plant-type cell wall biogenesis4.20E-02
172GO:0010311: lateral root formation4.20E-02
173GO:0007568: aging4.49E-02
174GO:0006970: response to osmotic stress4.81E-02
175GO:0034599: cellular response to oxidative stress4.94E-02
176GO:0015031: protein transport4.96E-02
RankGO TermAdjusted P value
1GO:0047844: deoxycytidine deaminase activity0.00E+00
2GO:0003855: 3-dehydroquinate dehydratase activity0.00E+00
3GO:0001729: ceramide kinase activity0.00E+00
4GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
5GO:0016229: steroid dehydrogenase activity0.00E+00
6GO:0016034: maleylacetoacetate isomerase activity0.00E+00
7GO:0051766: inositol trisphosphate kinase activity0.00E+00
8GO:0051670: inulinase activity0.00E+00
9GO:0004764: shikimate 3-dehydrogenase (NADP+) activity0.00E+00
10GO:0070401: NADP+ binding0.00E+00
11GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
12GO:0004601: peroxidase activity6.53E-06
13GO:0004364: glutathione transferase activity1.09E-05
14GO:0043295: glutathione binding1.93E-04
15GO:0004033: aldo-keto reductase (NADP) activity2.45E-04
16GO:0004348: glucosylceramidase activity2.60E-04
17GO:0031219: levanase activity2.60E-04
18GO:2001147: camalexin binding2.60E-04
19GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.60E-04
20GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.60E-04
21GO:0004649: poly(ADP-ribose) glycohydrolase activity2.60E-04
22GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.60E-04
23GO:0010179: IAA-Ala conjugate hydrolase activity2.60E-04
24GO:2001227: quercitrin binding2.60E-04
25GO:0004425: indole-3-glycerol-phosphate synthase activity2.60E-04
26GO:0000824: inositol tetrakisphosphate 3-kinase activity2.60E-04
27GO:0033984: indole-3-glycerol-phosphate lyase activity2.60E-04
28GO:0047326: inositol tetrakisphosphate 5-kinase activity2.60E-04
29GO:0051669: fructan beta-fructosidase activity2.60E-04
30GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.60E-04
31GO:0019172: glyoxalase III activity5.74E-04
32GO:0052691: UDP-arabinopyranose mutase activity5.74E-04
33GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity5.74E-04
34GO:0010331: gibberellin binding5.74E-04
35GO:0004617: phosphoglycerate dehydrogenase activity5.74E-04
36GO:0008428: ribonuclease inhibitor activity5.74E-04
37GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.31E-04
38GO:0004049: anthranilate synthase activity9.31E-04
39GO:0003979: UDP-glucose 6-dehydrogenase activity9.31E-04
40GO:0004478: methionine adenosyltransferase activity9.31E-04
41GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity9.31E-04
42GO:0004970: ionotropic glutamate receptor activity9.50E-04
43GO:0005217: intracellular ligand-gated ion channel activity9.50E-04
44GO:0004416: hydroxyacylglutathione hydrolase activity1.33E-03
45GO:0016149: translation release factor activity, codon specific1.33E-03
46GO:0004449: isocitrate dehydrogenase (NAD+) activity1.33E-03
47GO:0005432: calcium:sodium antiporter activity1.33E-03
48GO:0010178: IAA-amino acid conjugate hydrolase activity1.33E-03
49GO:0016656: monodehydroascorbate reductase (NADH) activity1.33E-03
50GO:0052656: L-isoleucine transaminase activity1.33E-03
51GO:0008106: alcohol dehydrogenase (NADP+) activity1.33E-03
52GO:0052654: L-leucine transaminase activity1.33E-03
53GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.33E-03
54GO:0052655: L-valine transaminase activity1.33E-03
55GO:0004031: aldehyde oxidase activity1.78E-03
56GO:0050302: indole-3-acetaldehyde oxidase activity1.78E-03
57GO:0016866: intramolecular transferase activity1.78E-03
58GO:0004930: G-protein coupled receptor activity1.78E-03
59GO:0050373: UDP-arabinose 4-epimerase activity1.78E-03
60GO:0004834: tryptophan synthase activity1.78E-03
61GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.78E-03
62GO:0004084: branched-chain-amino-acid transaminase activity1.78E-03
63GO:0008948: oxaloacetate decarboxylase activity2.27E-03
64GO:0018685: alkane 1-monooxygenase activity2.27E-03
65GO:0005471: ATP:ADP antiporter activity2.27E-03
66GO:0004791: thioredoxin-disulfide reductase activity2.47E-03
67GO:0020037: heme binding2.74E-03
68GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.80E-03
69GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.80E-03
70GO:0035252: UDP-xylosyltransferase activity2.80E-03
71GO:0008200: ion channel inhibitor activity2.80E-03
72GO:0015035: protein disulfide oxidoreductase activity2.94E-03
73GO:0004602: glutathione peroxidase activity3.36E-03
74GO:0005347: ATP transmembrane transporter activity3.36E-03
75GO:0003978: UDP-glucose 4-epimerase activity3.36E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity3.36E-03
77GO:0015217: ADP transmembrane transporter activity3.36E-03
78GO:0051920: peroxiredoxin activity3.36E-03
79GO:0004126: cytidine deaminase activity3.36E-03
80GO:0008237: metallopeptidase activity3.64E-03
81GO:0008320: protein transmembrane transporter activity3.97E-03
82GO:0015491: cation:cation antiporter activity4.60E-03
83GO:0004714: transmembrane receptor protein tyrosine kinase activity4.60E-03
84GO:0016209: antioxidant activity4.60E-03
85GO:0004034: aldose 1-epimerase activity4.60E-03
86GO:0004806: triglyceride lipase activity4.80E-03
87GO:0003951: NAD+ kinase activity5.27E-03
88GO:0030246: carbohydrate binding5.55E-03
89GO:0003747: translation release factor activity5.98E-03
90GO:0004568: chitinase activity7.47E-03
91GO:0008794: arsenate reductase (glutaredoxin) activity8.27E-03
92GO:0005198: structural molecule activity9.79E-03
93GO:0031072: heat shock protein binding9.94E-03
94GO:0051287: NAD binding1.06E-02
95GO:0005506: iron ion binding1.10E-02
96GO:0004867: serine-type endopeptidase inhibitor activity1.17E-02
97GO:0008061: chitin binding1.17E-02
98GO:0016301: kinase activity1.19E-02
99GO:0003824: catalytic activity1.33E-02
100GO:0008810: cellulase activity1.77E-02
101GO:0003727: single-stranded RNA binding1.88E-02
102GO:0047134: protein-disulfide reductase activity1.99E-02
103GO:0005199: structural constituent of cell wall2.22E-02
104GO:0030276: clathrin binding2.22E-02
105GO:0008080: N-acetyltransferase activity2.22E-02
106GO:0001085: RNA polymerase II transcription factor binding2.22E-02
107GO:0030170: pyridoxal phosphate binding2.33E-02
108GO:0010181: FMN binding2.34E-02
109GO:0016853: isomerase activity2.34E-02
110GO:0008565: protein transporter activity2.52E-02
111GO:0015297: antiporter activity2.77E-02
112GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.83E-02
113GO:0004674: protein serine/threonine kinase activity3.06E-02
114GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.09E-02
115GO:0008483: transaminase activity3.09E-02
116GO:0005509: calcium ion binding3.13E-02
117GO:0016597: amino acid binding3.22E-02
118GO:0030247: polysaccharide binding3.77E-02
119GO:0004683: calmodulin-dependent protein kinase activity3.77E-02
120GO:0102483: scopolin beta-glucosidase activity3.77E-02
121GO:0004222: metalloendopeptidase activity4.34E-02
122GO:0030145: manganese ion binding4.49E-02
123GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.49E-02
124GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.49E-02
125GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.79E-02
RankGO TermAdjusted P value
1GO:0030121: AP-1 adaptor complex0.00E+00
2GO:0005886: plasma membrane1.13E-05
3GO:0045252: oxoglutarate dehydrogenase complex2.60E-04
4GO:0005829: cytosol5.68E-04
5GO:0005950: anthranilate synthase complex5.74E-04
6GO:0009530: primary cell wall9.31E-04
7GO:0005794: Golgi apparatus3.19E-03
8GO:0032580: Golgi cisterna membrane3.42E-03
9GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.97E-03
10GO:0005788: endoplasmic reticulum lumen4.32E-03
11GO:0030131: clathrin adaptor complex4.60E-03
12GO:0005783: endoplasmic reticulum5.07E-03
13GO:0005779: integral component of peroxisomal membrane5.27E-03
14GO:0031901: early endosome membrane5.98E-03
15GO:0017119: Golgi transport complex7.47E-03
16GO:0005618: cell wall7.70E-03
17GO:0016021: integral component of membrane8.82E-03
18GO:0005737: cytoplasm9.56E-03
19GO:0031012: extracellular matrix9.94E-03
20GO:0009570: chloroplast stroma1.04E-02
21GO:0005905: clathrin-coated pit1.56E-02
22GO:0009505: plant-type cell wall1.67E-02
23GO:0005743: mitochondrial inner membrane1.95E-02
24GO:0005789: endoplasmic reticulum membrane2.33E-02
25GO:0009504: cell plate2.46E-02
26GO:0031965: nuclear membrane2.46E-02
27GO:0019898: extrinsic component of membrane2.46E-02
28GO:0009506: plasmodesma2.70E-02
29GO:0071944: cell periphery2.83E-02
30GO:0005768: endosome3.02E-02
31GO:0016020: membrane3.20E-02
32GO:0005576: extracellular region3.48E-02
33GO:0005773: vacuole3.56E-02
34GO:0005667: transcription factor complex3.63E-02
35GO:0005774: vacuolar membrane3.72E-02
36GO:0046658: anchored component of plasma membrane3.84E-02
37GO:0048046: apoplast4.06E-02
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Gene type



Gene DE type