gene detail

Gene description

TAIR ID: AT5G59710

Short description: VIRE2 interacting protein 2

Pathogen responsiveness: -2.88

General responsiveness: -3.56

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G010357

Wheat:

TA.8378.1.A1_AT TA.8378.1.A1_X_AT

GO biological process

regulation of transcription, DNA-templated, negative regulation of transcription, DNA integration, transcription, nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, negative regulation of translation

GO cellular component

P-body, CCR4-NOT core complex, nucleus

GO molecular function

protein binding

Protein domain

Pfam	PF04153, NOT2 / NOT3 / NOT5 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition