gene detail

Gene description

TAIR ID: AT5G58590

Short description: RAN binding protein 1

Pathogen responsiveness: -2.56

General responsiveness: -0.50

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G111411 GRMZM2G094388

Wheat: No orthologous gene

GO biological process

RNA export from nucleus, ubiquitin-dependent protein catabolic process, spindle organization, protein import into nucleus, translocation, G1/S transition of mitotic cell cycle, mRNA transport

GO cellular component

nucleus, nuclear pore, cytoplasm

GO molecular function

GTPase activator activity, Ran GTPase binding

Protein domain

Pfam	PF00638, RanBP1 domain
SMART	SM00160, RanBD

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.50	7.51E-09