GO Enrichment Analysis of Co-expressed Genes with
AT5G58590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 2 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 3 | GO:0031990: mRNA export from nucleus in response to heat stress | 0.00E+00 |
| 4 | GO:0006482: protein demethylation | 0.00E+00 |
| 5 | GO:0046686: response to cadmium ion | 8.23E-07 |
| 6 | GO:0006099: tricarboxylic acid cycle | 5.23E-06 |
| 7 | GO:0006097: glyoxylate cycle | 1.16E-05 |
| 8 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.77E-05 |
| 9 | GO:0051938: L-glutamate import | 8.61E-05 |
| 10 | GO:1990641: response to iron ion starvation | 8.61E-05 |
| 11 | GO:0080173: male-female gamete recognition during double fertilization | 8.61E-05 |
| 12 | GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex | 8.61E-05 |
| 13 | GO:0003400: regulation of COPII vesicle coating | 8.61E-05 |
| 14 | GO:1901183: positive regulation of camalexin biosynthetic process | 8.61E-05 |
| 15 | GO:0019544: arginine catabolic process to glutamate | 8.61E-05 |
| 16 | GO:0080093: regulation of photorespiration | 8.61E-05 |
| 17 | GO:0048448: stamen morphogenesis | 8.61E-05 |
| 18 | GO:0048455: stamen formation | 8.61E-05 |
| 19 | GO:0031998: regulation of fatty acid beta-oxidation | 8.61E-05 |
| 20 | GO:0010450: inflorescence meristem growth | 8.61E-05 |
| 21 | GO:0009853: photorespiration | 1.20E-04 |
| 22 | GO:0048833: specification of floral organ number | 2.04E-04 |
| 23 | GO:0019521: D-gluconate metabolic process | 2.04E-04 |
| 24 | GO:0019374: galactolipid metabolic process | 2.04E-04 |
| 25 | GO:0051788: response to misfolded protein | 2.04E-04 |
| 26 | GO:0045948: positive regulation of translational initiation | 2.04E-04 |
| 27 | GO:0006101: citrate metabolic process | 2.04E-04 |
| 28 | GO:0043091: L-arginine import | 2.04E-04 |
| 29 | GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 3.42E-04 |
| 30 | GO:0009651: response to salt stress | 4.59E-04 |
| 31 | GO:0072334: UDP-galactose transmembrane transport | 4.92E-04 |
| 32 | GO:0042823: pyridoxal phosphate biosynthetic process | 4.92E-04 |
| 33 | GO:0019252: starch biosynthetic process | 6.01E-04 |
| 34 | GO:1902584: positive regulation of response to water deprivation | 6.55E-04 |
| 35 | GO:0010363: regulation of plant-type hypersensitive response | 6.55E-04 |
| 36 | GO:0010286: heat acclimation | 8.18E-04 |
| 37 | GO:0045927: positive regulation of growth | 8.29E-04 |
| 38 | GO:0043248: proteasome assembly | 1.01E-03 |
| 39 | GO:0035435: phosphate ion transmembrane transport | 1.01E-03 |
| 40 | GO:0006796: phosphate-containing compound metabolic process | 1.01E-03 |
| 41 | GO:0006014: D-ribose metabolic process | 1.01E-03 |
| 42 | GO:1901001: negative regulation of response to salt stress | 1.20E-03 |
| 43 | GO:0034389: lipid particle organization | 1.20E-03 |
| 44 | GO:0009082: branched-chain amino acid biosynthetic process | 1.20E-03 |
| 45 | GO:0009099: valine biosynthetic process | 1.20E-03 |
| 46 | GO:0048767: root hair elongation | 1.23E-03 |
| 47 | GO:0010043: response to zinc ion | 1.35E-03 |
| 48 | GO:0080186: developmental vegetative growth | 1.41E-03 |
| 49 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 1.41E-03 |
| 50 | GO:0071669: plant-type cell wall organization or biogenesis | 1.41E-03 |
| 51 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.41E-03 |
| 52 | GO:0042773: ATP synthesis coupled electron transport | 1.41E-03 |
| 53 | GO:0048528: post-embryonic root development | 1.41E-03 |
| 54 | GO:0006810: transport | 1.46E-03 |
| 55 | GO:0009061: anaerobic respiration | 1.63E-03 |
| 56 | GO:0005978: glycogen biosynthetic process | 1.63E-03 |
| 57 | GO:0006102: isocitrate metabolic process | 1.63E-03 |
| 58 | GO:0006644: phospholipid metabolic process | 1.63E-03 |
| 59 | GO:0009880: embryonic pattern specification | 1.86E-03 |
| 60 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.86E-03 |
| 61 | GO:0010120: camalexin biosynthetic process | 1.86E-03 |
| 62 | GO:0009097: isoleucine biosynthetic process | 1.86E-03 |
| 63 | GO:0006098: pentose-phosphate shunt | 2.10E-03 |
| 64 | GO:0043067: regulation of programmed cell death | 2.35E-03 |
| 65 | GO:0009098: leucine biosynthetic process | 2.35E-03 |
| 66 | GO:0009809: lignin biosynthetic process | 2.54E-03 |
| 67 | GO:0009408: response to heat | 3.01E-03 |
| 68 | GO:0006790: sulfur compound metabolic process | 3.15E-03 |
| 69 | GO:0006108: malate metabolic process | 3.43E-03 |
| 70 | GO:0006979: response to oxidative stress | 3.48E-03 |
| 71 | GO:0046854: phosphatidylinositol phosphorylation | 4.03E-03 |
| 72 | GO:0010053: root epidermal cell differentiation | 4.03E-03 |
| 73 | GO:0034976: response to endoplasmic reticulum stress | 4.34E-03 |
| 74 | GO:0007010: cytoskeleton organization | 4.65E-03 |
| 75 | GO:0006289: nucleotide-excision repair | 4.65E-03 |
| 76 | GO:0006366: transcription from RNA polymerase II promoter | 5.32E-03 |
| 77 | GO:0003333: amino acid transmembrane transport | 5.32E-03 |
| 78 | GO:0016226: iron-sulfur cluster assembly | 5.66E-03 |
| 79 | GO:0006012: galactose metabolic process | 6.01E-03 |
| 80 | GO:0009555: pollen development | 6.22E-03 |
| 81 | GO:0009306: protein secretion | 6.36E-03 |
| 82 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 6.91E-03 |
| 83 | GO:0034220: ion transmembrane transport | 7.10E-03 |
| 84 | GO:0006457: protein folding | 8.63E-03 |
| 85 | GO:0032502: developmental process | 9.07E-03 |
| 86 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.18E-03 |
| 87 | GO:0030163: protein catabolic process | 9.48E-03 |
| 88 | GO:0010252: auxin homeostasis | 9.91E-03 |
| 89 | GO:0009615: response to virus | 1.12E-02 |
| 90 | GO:0010029: regulation of seed germination | 1.17E-02 |
| 91 | GO:0009816: defense response to bacterium, incompatible interaction | 1.17E-02 |
| 92 | GO:0006974: cellular response to DNA damage stimulus | 1.21E-02 |
| 93 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.26E-02 |
| 94 | GO:0008219: cell death | 1.35E-02 |
| 95 | GO:0045454: cell redox homeostasis | 1.42E-02 |
| 96 | GO:0032259: methylation | 1.68E-02 |
| 97 | GO:0016042: lipid catabolic process | 1.71E-02 |
| 98 | GO:0006839: mitochondrial transport | 1.76E-02 |
| 99 | GO:0009733: response to auxin | 1.76E-02 |
| 100 | GO:0042542: response to hydrogen peroxide | 1.86E-02 |
| 101 | GO:0051707: response to other organism | 1.92E-02 |
| 102 | GO:0009744: response to sucrose | 1.92E-02 |
| 103 | GO:0009965: leaf morphogenesis | 2.08E-02 |
| 104 | GO:0006855: drug transmembrane transport | 2.14E-02 |
| 105 | GO:0009664: plant-type cell wall organization | 2.25E-02 |
| 106 | GO:0006486: protein glycosylation | 2.37E-02 |
| 107 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.43E-02 |
| 108 | GO:0048316: seed development | 2.73E-02 |
| 109 | GO:0009735: response to cytokinin | 2.85E-02 |
| 110 | GO:0018105: peptidyl-serine phosphorylation | 3.11E-02 |
| 111 | GO:0009611: response to wounding | 3.19E-02 |
| 112 | GO:0009845: seed germination | 3.78E-02 |
| 113 | GO:0040008: regulation of growth | 4.34E-02 |
| 114 | GO:0010150: leaf senescence | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004622: lysophospholipase activity | 0.00E+00 |
| 2 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 3 | GO:0003846: 2-acylglycerol O-acyltransferase activity | 0.00E+00 |
| 4 | GO:0051723: protein methylesterase activity | 0.00E+00 |
| 5 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 6 | GO:0000104: succinate dehydrogenase activity | 1.16E-05 |
| 7 | GO:0031593: polyubiquitin binding | 1.77E-05 |
| 8 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 8.61E-05 |
| 9 | GO:0005090: Sar guanyl-nucleotide exchange factor activity | 8.61E-05 |
| 10 | GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity | 8.61E-05 |
| 11 | GO:0008171: O-methyltransferase activity | 1.03E-04 |
| 12 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.04E-04 |
| 13 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.04E-04 |
| 14 | GO:0018708: thiol S-methyltransferase activity | 2.04E-04 |
| 15 | GO:0019172: glyoxalase III activity | 2.04E-04 |
| 16 | GO:0015036: disulfide oxidoreductase activity | 2.04E-04 |
| 17 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.04E-04 |
| 18 | GO:0003994: aconitate hydratase activity | 2.04E-04 |
| 19 | GO:0051536: iron-sulfur cluster binding | 2.63E-04 |
| 20 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.42E-04 |
| 21 | GO:0016805: dipeptidase activity | 3.42E-04 |
| 22 | GO:0005524: ATP binding | 4.52E-04 |
| 23 | GO:0008276: protein methyltransferase activity | 4.92E-04 |
| 24 | GO:0001653: peptide receptor activity | 4.92E-04 |
| 25 | GO:0015181: arginine transmembrane transporter activity | 4.92E-04 |
| 26 | GO:0042299: lupeol synthase activity | 4.92E-04 |
| 27 | GO:0052656: L-isoleucine transaminase activity | 4.92E-04 |
| 28 | GO:0052654: L-leucine transaminase activity | 4.92E-04 |
| 29 | GO:0052655: L-valine transaminase activity | 4.92E-04 |
| 30 | GO:0015189: L-lysine transmembrane transporter activity | 4.92E-04 |
| 31 | GO:0008453: alanine-glyoxylate transaminase activity | 6.55E-04 |
| 32 | GO:0005313: L-glutamate transmembrane transporter activity | 6.55E-04 |
| 33 | GO:0004084: branched-chain-amino-acid transaminase activity | 6.55E-04 |
| 34 | GO:0016866: intramolecular transferase activity | 6.55E-04 |
| 35 | GO:0070628: proteasome binding | 6.55E-04 |
| 36 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 6.55E-04 |
| 37 | GO:0010279: indole-3-acetic acid amido synthetase activity | 6.55E-04 |
| 38 | GO:0005459: UDP-galactose transmembrane transporter activity | 8.29E-04 |
| 39 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 8.29E-04 |
| 40 | GO:0005496: steroid binding | 8.29E-04 |
| 41 | GO:0005215: transporter activity | 8.92E-04 |
| 42 | GO:0031369: translation initiation factor binding | 1.01E-03 |
| 43 | GO:0016462: pyrophosphatase activity | 1.01E-03 |
| 44 | GO:0016615: malate dehydrogenase activity | 1.01E-03 |
| 45 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.20E-03 |
| 46 | GO:0004747: ribokinase activity | 1.20E-03 |
| 47 | GO:0030060: L-malate dehydrogenase activity | 1.20E-03 |
| 48 | GO:0003978: UDP-glucose 4-epimerase activity | 1.20E-03 |
| 49 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.20E-03 |
| 50 | GO:0051020: GTPase binding | 1.20E-03 |
| 51 | GO:0051920: peroxiredoxin activity | 1.20E-03 |
| 52 | GO:0008235: metalloexopeptidase activity | 1.41E-03 |
| 53 | GO:0004427: inorganic diphosphatase activity | 1.41E-03 |
| 54 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.41E-03 |
| 55 | GO:0004620: phospholipase activity | 1.41E-03 |
| 56 | GO:0008865: fructokinase activity | 1.63E-03 |
| 57 | GO:0016209: antioxidant activity | 1.63E-03 |
| 58 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.68E-03 |
| 59 | GO:0005507: copper ion binding | 2.01E-03 |
| 60 | GO:0015174: basic amino acid transmembrane transporter activity | 2.35E-03 |
| 61 | GO:0047617: acyl-CoA hydrolase activity | 2.35E-03 |
| 62 | GO:0004177: aminopeptidase activity | 2.87E-03 |
| 63 | GO:0015114: phosphate ion transmembrane transporter activity | 3.43E-03 |
| 64 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.43E-03 |
| 65 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.43E-03 |
| 66 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.43E-03 |
| 67 | GO:0051082: unfolded protein binding | 3.59E-03 |
| 68 | GO:0043130: ubiquitin binding | 4.65E-03 |
| 69 | GO:0003954: NADH dehydrogenase activity | 4.65E-03 |
| 70 | GO:0016887: ATPase activity | 5.24E-03 |
| 71 | GO:0004298: threonine-type endopeptidase activity | 5.32E-03 |
| 72 | GO:0003756: protein disulfide isomerase activity | 6.36E-03 |
| 73 | GO:0003727: single-stranded RNA binding | 6.36E-03 |
| 74 | GO:0005199: structural constituent of cell wall | 7.48E-03 |
| 75 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 8.66E-03 |
| 76 | GO:0000287: magnesium ion binding | 9.38E-03 |
| 77 | GO:0003684: damaged DNA binding | 9.91E-03 |
| 78 | GO:0005200: structural constituent of cytoskeleton | 1.03E-02 |
| 79 | GO:0016787: hydrolase activity | 1.09E-02 |
| 80 | GO:0015250: water channel activity | 1.12E-02 |
| 81 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.21E-02 |
| 82 | GO:0004683: calmodulin-dependent protein kinase activity | 1.26E-02 |
| 83 | GO:0015238: drug transmembrane transporter activity | 1.40E-02 |
| 84 | GO:0005096: GTPase activator activity | 1.40E-02 |
| 85 | GO:0050897: cobalt ion binding | 1.50E-02 |
| 86 | GO:0030145: manganese ion binding | 1.50E-02 |
| 87 | GO:0003697: single-stranded DNA binding | 1.60E-02 |
| 88 | GO:0009055: electron carrier activity | 1.89E-02 |
| 89 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.02E-02 |
| 90 | GO:0005198: structural molecule activity | 2.08E-02 |
| 91 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.37E-02 |
| 92 | GO:0015171: amino acid transmembrane transporter activity | 2.55E-02 |
| 93 | GO:0045735: nutrient reservoir activity | 2.67E-02 |
| 94 | GO:0000166: nucleotide binding | 3.12E-02 |
| 95 | GO:0030170: pyridoxal phosphate binding | 3.85E-02 |
| 96 | GO:0015297: antiporter activity | 4.34E-02 |
| 97 | GO:0008194: UDP-glycosyltransferase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 2 | GO:0005829: cytosol | 1.63E-06 |
| 3 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 4.50E-05 |
| 4 | GO:0031314: extrinsic component of mitochondrial inner membrane | 2.04E-04 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.10E-04 |
| 6 | GO:0000502: proteasome complex | 2.59E-04 |
| 7 | GO:0045271: respiratory chain complex I | 2.91E-04 |
| 8 | GO:0009530: primary cell wall | 3.42E-04 |
| 9 | GO:0005774: vacuolar membrane | 4.93E-04 |
| 10 | GO:0005737: cytoplasm | 5.42E-04 |
| 11 | GO:0005783: endoplasmic reticulum | 7.05E-04 |
| 12 | GO:0030173: integral component of Golgi membrane | 1.20E-03 |
| 13 | GO:0005886: plasma membrane | 1.36E-03 |
| 14 | GO:0005777: peroxisome | 1.45E-03 |
| 15 | GO:0045273: respiratory chain complex II | 1.63E-03 |
| 16 | GO:0005811: lipid particle | 1.86E-03 |
| 17 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.35E-03 |
| 18 | GO:0031966: mitochondrial membrane | 2.37E-03 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 3.09E-03 |
| 20 | GO:0016020: membrane | 3.09E-03 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.15E-03 |
| 22 | GO:0005750: mitochondrial respiratory chain complex III | 3.73E-03 |
| 23 | GO:0005773: vacuole | 4.24E-03 |
| 24 | GO:0005739: mitochondrion | 5.24E-03 |
| 25 | GO:0005839: proteasome core complex | 5.32E-03 |
| 26 | GO:0005618: cell wall | 8.27E-03 |
| 27 | GO:0005778: peroxisomal membrane | 1.03E-02 |
| 28 | GO:0000932: P-body | 1.12E-02 |
| 29 | GO:0005788: endoplasmic reticulum lumen | 1.17E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 1.63E-02 |
| 31 | GO:0005856: cytoskeleton | 2.08E-02 |
| 32 | GO:0005730: nucleolus | 2.95E-02 |
| 33 | GO:0005759: mitochondrial matrix | 4.20E-02 |
| 34 | GO:0005794: Golgi apparatus | 4.30E-02 |