Gene: AT5G58003
     


Gene description


TAIR ID: AT5G58003

Short description: C-terminal domain phosphatase-like 4

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G090262  

Wheat:

TAAFFX.91676.1.A1_AT  


GO biological process


dephosphorylation of RNA polymerase II C-terminal domain, transcription, DNA-templated, response to salt stress


GO cellular component


DNA-directed RNA polymerase II, holoenzyme, nucleus


GO molecular function


CTD phosphatase activity, phosphoprotein phosphatase activity, metal ion binding, RNA binding, protein C-terminus binding


Protein domain


PfamPF00533, BRCA1 C Terminus (BRCT) domain
PfamPF03031, NLI interacting factor-like phosphatase
SMARTSM00577, CPDc
SMARTSM00292, BRCT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT3G14230, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.002.12E-02






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