gene detail

Gene description

TAIR ID: AT5G57800

Short description: Fatty acid hydroxylase superfamily

Pathogen responsiveness: -0.21

General responsiveness: 0.18

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G114642

Wheat: No orthologous gene

GO biological process

pollen sperm cell differentiation, wax biosynthetic process, cuticle hydrocarbon biosynthetic process, lipid biosynthetic process, cuticle development, lipid metabolic process, alkane biosynthetic process, oxidation-reduction process

GO cellular component

plasma membrane, endoplasmic reticulum membrane, integral component of membrane, membrane

GO molecular function

iron ion binding, oxidoreductase activity, catalytic activity

Protein domain

Pfam	PF12076, WAX2 C-terminal domain
Pfam	PF04116, Fatty acid hydroxylase superfamily

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-1.55	3.37E-07
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-1.65	8.44E-03
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-2.10	8.81E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-1.70	2.13E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-1.64	3.32E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-2.56	1.22E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.31	2.79E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.62	1.58E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.62	4.87E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.46	1.20E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.74	2.80E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.25	4.13E-11
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.94	5.93E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.87	1.22E-08
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.69	1.10E-06
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.61	1.40E-06
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-1.80	3.43E-07