Gene: AT5G57740
     


Gene description


TAIR ID: AT5G57740

Short description: XB3 ortholog 2 in Arabidopsis thaliana

Pathogen responsiveness: -2.17

General responsiveness: -1.36

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G446313  

Wheat: No orthologous gene

GO biological process


protein autoubiquitination, protein ubiquitination, ubiquitin-dependent protein catabolic process, response to auxin, negative regulation of ethylene biosynthetic process, lateral root formation


GO cellular component


unkown


GO molecular function


protein binding, ubiquitin-protein transferase activity, metal ion binding


Protein domain


PfamPF12796, Ankyrin repeats (3 copies)
SMARTSM00248, ANK
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000  view

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.888.01E-03






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