Gene: AT5G57360
     


Gene description


TAIR ID: AT5G57360

Short description: Galactose oxidase/kelch repeat superfamily protein

Pathogen responsiveness: -2.75

General responsiveness: -1.88

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G113244  

Wheat: No orthologous gene

GO biological process


flower development, protein-chromophore linkage, rhythmic process, SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, regulation of circadian rhythm, protein ubiquitination, circadian rhythm, proteasomal protein catabolic process, entrainment of circadian clock by photoperiod, ubiquitin-dependent protein catabolic process, response to red light


GO cellular component


nucleus, cytoplasm, cytosol, SCF ubiquitin ligase complex


GO molecular function


protein binding, ubiquitin-protein transferase activity, photoreceptor activity, blue light photoreceptor activity


Protein domain


PfamPF13415, Galactose oxidase, central domain
PfamPF13418, Galactose oxidase, central domain
PfamPF13426, PAS domain
PfamPF12937, F-box-like
SMARTSM00256, FBOX

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G46830

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 26 (Top10%)

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.571.24E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.