Gene: AT5G57150
     


Gene description


TAIR ID: AT5G57150

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.12

General responsiveness: -0.48

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G042895  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus, integral component of membrane


GO molecular function


protein dimerization activity, DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.498.83E-07
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.633.81E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.951.30E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.152.57E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.752.35E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.894.90E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.927.50E-07
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.832.42E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.861.18E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.919.72E-07
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.584.68E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.492.22E-05
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.032.02E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.568.44E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.181.01E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.801.73E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.733.69E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.484.48E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.938.66E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.741.58E-06
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h1.571.00E-03
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.284.77E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.741.54E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.634.71E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.347.94E-06
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.641.08E-02






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