Gene: AT5G56040
     

Gene description


TAIR ID: AT5G56040

Short description: Leucine-rich receptor-like protein kinase family protein

Pathogen responsiveness: 0.15

General responsiveness: -0.79

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G039431   GRMZM2G149051  

Wheat: No orthologous gene

GO biological process


protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, regulation of root meristem growth


GO cellular component


plasma membrane


GO molecular function


protein serine/threonine kinase activity, kinase activity


Protein domain


PfamPF00069, Protein kinase domain
PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF13855, Leucine rich repeat
SMARTSM00220, S_TKc
SMARTSM00369, LRR_TYP

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 26 (Top10%)

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h-1.852.85E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.746.07E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.143.16E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.483.28E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.619.18E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.424.49E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.781.83E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.531.18E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.896.36E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.982.91E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.711.24E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.902.82E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.684.34E-11
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.912.27E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.744.32E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.711.06E-14
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.524.09E-12
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.542.78E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.674.63E-14
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.675.73E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.813.37E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.201.03E-04






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