Gene: AT5G55850
     

Gene description


TAIR ID: AT5G55850

Short description: RPM1-interacting protein 4 (RIN4) family protein

Pathogen responsiveness: -0.78

General responsiveness: -2.15

Orthologous


Rice:

OS09G0253000  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to nitrate


GO cellular component


nucleus, plasma membrane


GO molecular function


molecular_function


Protein domain


PfamPF05627, Cleavage site for pathogenic type III effector avirulence factor Avr

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


No Interactor


Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.612.02E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.002.20E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.852.50E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.947.35E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.881.58E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.148.26E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.192.45E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.691.41E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.911.99E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.727.54E-11






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