co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048034: heme O biosynthetic process	0.00E+00
2	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
3	GO:0010398: xylogalacturonan metabolic process	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:0006903: vesicle targeting	0.00E+00
6	GO:0046283: anthocyanin-containing compound metabolic process	8.97E-06
7	GO:0009058: biosynthetic process	3.62E-05
8	GO:0009821: alkaloid biosynthetic process	5.64E-05
9	GO:0042964: thioredoxin reduction	7.39E-05
10	GO:0006807: nitrogen compound metabolic process	1.31E-04
11	GO:1902000: homogentisate catabolic process	1.77E-04
12	GO:0043132: NAD transport	1.77E-04
13	GO:0046939: nucleotide phosphorylation	1.77E-04
14	GO:0010372: positive regulation of gibberellin biosynthetic process	1.77E-04
15	GO:0046686: response to cadmium ion	2.40E-04
16	GO:0055074: calcium ion homeostasis	2.99E-04
17	GO:0044375: regulation of peroxisome size	2.99E-04
18	GO:0090630: activation of GTPase activity	2.99E-04
19	GO:0009072: aromatic amino acid family metabolic process	2.99E-04
20	GO:0015858: nucleoside transport	4.32E-04
21	GO:0006612: protein targeting to membrane	4.32E-04
22	GO:0006893: Golgi to plasma membrane transport	4.32E-04
23	GO:0009851: auxin biosynthetic process	4.95E-04
24	GO:0006878: cellular copper ion homeostasis	5.75E-04
25	GO:1901657: glycosyl compound metabolic process	6.01E-04
26	GO:0006564: L-serine biosynthetic process	7.29E-04
27	GO:0097428: protein maturation by iron-sulfur cluster transfer	7.29E-04
28	GO:0009615: response to virus	7.56E-04
29	GO:0009228: thiamine biosynthetic process	8.91E-04
30	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	8.91E-04
31	GO:0009082: branched-chain amino acid biosynthetic process	1.06E-03
32	GO:0009099: valine biosynthetic process	1.06E-03
33	GO:0009554: megasporogenesis	1.06E-03
34	GO:0009407: toxin catabolic process	1.07E-03
35	GO:0071669: plant-type cell wall organization or biogenesis	1.24E-03
36	GO:0006099: tricarboxylic acid cycle	1.27E-03
37	GO:0009723: response to ethylene	1.31E-03
38	GO:0006402: mRNA catabolic process	1.43E-03
39	GO:0006102: isocitrate metabolic process	1.43E-03
40	GO:0019430: removal of superoxide radicals	1.63E-03
41	GO:0009097: isoleucine biosynthetic process	1.63E-03
42	GO:0010204: defense response signaling pathway, resistance gene-independent	1.63E-03
43	GO:0022900: electron transport chain	1.63E-03
44	GO:0060321: acceptance of pollen	1.63E-03
45	GO:0007186: G-protein coupled receptor signaling pathway	1.63E-03
46	GO:0006783: heme biosynthetic process	1.83E-03
47	GO:0046685: response to arsenic-containing substance	1.83E-03
48	GO:0009846: pollen germination	1.94E-03
49	GO:0009098: leucine biosynthetic process	2.05E-03
50	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.05E-03
51	GO:0009688: abscisic acid biosynthetic process	2.28E-03
52	GO:0043069: negative regulation of programmed cell death	2.28E-03
53	GO:0009751: response to salicylic acid	2.29E-03
54	GO:0052544: defense response by callose deposition in cell wall	2.51E-03
55	GO:0042742: defense response to bacterium	2.52E-03
56	GO:0009626: plant-type hypersensitive response	2.61E-03
57	GO:0009620: response to fungus	2.70E-03
58	GO:0016925: protein sumoylation	2.75E-03
59	GO:0006790: sulfur compound metabolic process	2.75E-03
60	GO:0002213: defense response to insect	2.75E-03
61	GO:0034605: cellular response to heat	3.25E-03
62	GO:0046854: phosphatidylinositol phosphorylation	3.51E-03
63	GO:0007031: peroxisome organization	3.51E-03
64	GO:0000162: tryptophan biosynthetic process	3.78E-03
65	GO:0045333: cellular respiration	4.06E-03
66	GO:0006825: copper ion transport	4.34E-03
67	GO:0006874: cellular calcium ion homeostasis	4.34E-03
68	GO:0010150: leaf senescence	5.06E-03
69	GO:0010227: floral organ abscission	5.23E-03
70	GO:0009306: protein secretion	5.54E-03
71	GO:0051028: mRNA transport	5.86E-03
72	GO:0010118: stomatal movement	6.18E-03
73	GO:0045489: pectin biosynthetic process	6.51E-03
74	GO:0010183: pollen tube guidance	7.19E-03
75	GO:0031047: gene silencing by RNA	7.89E-03
76	GO:0009630: gravitropism	7.89E-03
77	GO:0030163: protein catabolic process	8.25E-03
78	GO:0006464: cellular protein modification process	8.61E-03
79	GO:0006904: vesicle docking involved in exocytosis	8.98E-03
80	GO:0016049: cell growth	1.13E-02
81	GO:0006499: N-terminal protein myristoylation	1.26E-02
82	GO:0010119: regulation of stomatal movement	1.30E-02
83	GO:0007568: aging	1.30E-02
84	GO:0016042: lipid catabolic process	1.40E-02
85	GO:0006629: lipid metabolic process	1.44E-02
86	GO:0006839: mitochondrial transport	1.52E-02
87	GO:0009753: response to jasmonic acid	1.54E-02
88	GO:0006887: exocytosis	1.57E-02
89	GO:0015031: protein transport	1.60E-02
90	GO:0009926: auxin polar transport	1.66E-02
91	GO:0051707: response to other organism	1.66E-02
92	GO:0009636: response to toxic substance	1.80E-02
93	GO:0006855: drug transmembrane transport	1.85E-02
94	GO:0031347: regulation of defense response	1.90E-02
95	GO:0009664: plant-type cell wall organization	1.95E-02
96	GO:0006096: glycolytic process	2.31E-02
97	GO:0009735: response to cytokinin	2.33E-02
98	GO:0048316: seed development	2.37E-02
99	GO:0009611: response to wounding	2.61E-02
100	GO:0009624: response to nematode	2.64E-02
101	GO:0006457: protein folding	3.30E-02
102	GO:0042744: hydrogen peroxide catabolic process	3.39E-02
103	GO:0006511: ubiquitin-dependent protein catabolic process	3.47E-02
104	GO:0009739: response to gibberellin	4.22E-02
105	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.22E-02
106	GO:0007166: cell surface receptor signaling pathway	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
2	GO:0044610: FMN transmembrane transporter activity	0.00E+00
3	GO:0008495: protoheme IX farnesyltransferase activity	0.00E+00
4	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
7	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.38E-05
8	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.38E-05
9	GO:0016844: strictosidine synthase activity	6.89E-05
10	GO:0047326: inositol tetrakisphosphate 5-kinase activity	7.39E-05
11	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	7.39E-05
12	GO:0048037: cofactor binding	7.39E-05
13	GO:0015230: FAD transmembrane transporter activity	7.39E-05
14	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	7.39E-05
15	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	7.39E-05
16	GO:0010013: N-1-naphthylphthalamic acid binding	7.39E-05
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	7.39E-05
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	7.39E-05
19	GO:0019172: glyoxalase III activity	1.77E-04
20	GO:0008517: folic acid transporter activity	1.77E-04
21	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.77E-04
22	GO:0004566: beta-glucuronidase activity	1.77E-04
23	GO:0015228: coenzyme A transmembrane transporter activity	1.77E-04
24	GO:0052739: phosphatidylserine 1-acylhydrolase activity	1.77E-04
25	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	1.77E-04
26	GO:0051724: NAD transporter activity	1.77E-04
27	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.77E-04
28	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	2.99E-04
29	GO:0019829: cation-transporting ATPase activity	2.99E-04
30	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.32E-04
31	GO:0052656: L-isoleucine transaminase activity	4.32E-04
32	GO:0052654: L-leucine transaminase activity	4.32E-04
33	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	4.32E-04
34	GO:0052655: L-valine transaminase activity	4.32E-04
35	GO:0019201: nucleotide kinase activity	4.32E-04
36	GO:0004930: G-protein coupled receptor activity	5.75E-04
37	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	5.75E-04
38	GO:0004031: aldehyde oxidase activity	5.75E-04
39	GO:0050302: indole-3-acetaldehyde oxidase activity	5.75E-04
40	GO:0004659: prenyltransferase activity	5.75E-04
41	GO:0004834: tryptophan synthase activity	5.75E-04
42	GO:0004084: branched-chain-amino-acid transaminase activity	5.75E-04
43	GO:0080122: AMP transmembrane transporter activity	7.29E-04
44	GO:0031386: protein tag	7.29E-04
45	GO:0008374: O-acyltransferase activity	7.29E-04
46	GO:0102483: scopolin beta-glucosidase activity	8.83E-04
47	GO:0035252: UDP-xylosyltransferase activity	8.91E-04
48	GO:0004017: adenylate kinase activity	1.06E-03
49	GO:0005347: ATP transmembrane transporter activity	1.06E-03
50	GO:0015217: ADP transmembrane transporter activity	1.06E-03
51	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.06E-03
52	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.24E-03
53	GO:0008422: beta-glucosidase activity	1.32E-03
54	GO:0004311: farnesyltranstransferase activity	1.43E-03
55	GO:0005507: copper ion binding	1.48E-03
56	GO:0004364: glutathione transferase activity	1.50E-03
57	GO:0005375: copper ion transmembrane transporter activity	1.63E-03
58	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.63E-03
59	GO:0030955: potassium ion binding	2.05E-03
60	GO:0004743: pyruvate kinase activity	2.05E-03
61	GO:0004177: aminopeptidase activity	2.51E-03
62	GO:0008559: xenobiotic-transporting ATPase activity	2.51E-03
63	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.00E-03
64	GO:0004022: alcohol dehydrogenase (NAD) activity	3.00E-03
65	GO:0005217: intracellular ligand-gated ion channel activity	3.51E-03
66	GO:0004970: ionotropic glutamate receptor activity	3.51E-03
67	GO:0030170: pyridoxal phosphate binding	4.08E-03
68	GO:0004298: threonine-type endopeptidase activity	4.63E-03
69	GO:0005199: structural constituent of cell wall	6.51E-03
70	GO:0004791: thioredoxin-disulfide reductase activity	6.84E-03
71	GO:0000287: magnesium ion binding	7.68E-03
72	GO:0004601: peroxidase activity	7.82E-03
73	GO:0004518: nuclease activity	7.89E-03
74	GO:0016788: hydrolase activity, acting on ester bonds	7.97E-03
75	GO:0043531: ADP binding	8.58E-03
76	GO:0005096: GTPase activator activity	1.22E-02
77	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.30E-02
78	GO:0003824: catalytic activity	1.33E-02
79	GO:0051537: 2 iron, 2 sulfur cluster binding	1.76E-02
80	GO:0005198: structural molecule activity	1.80E-02
81	GO:0051287: NAD binding	1.90E-02
82	GO:0016298: lipase activity	2.10E-02
83	GO:0000166: nucleotide binding	2.55E-02
84	GO:0051082: unfolded protein binding	2.64E-02
85	GO:0016740: transferase activity	3.11E-02
86	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.37E-02
87	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.70E-02
88	GO:0015297: antiporter activity	3.77E-02
89	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.62E-02
90	GO:0042802: identical protein binding	4.62E-02
91	GO:0005509: calcium ion binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	7.39E-05
2	GO:0009530: primary cell wall	2.99E-04
3	GO:0046861: glyoxysomal membrane	2.99E-04
4	GO:0005829: cytosol	3.37E-04
5	GO:0005778: peroxisomal membrane	6.76E-04
6	GO:0009514: glyoxysome	1.63E-03
7	GO:0019773: proteasome core complex, alpha-subunit complex	1.63E-03
8	GO:0005779: integral component of peroxisomal membrane	1.63E-03
9	GO:0031090: organelle membrane	1.83E-03
10	GO:0010494: cytoplasmic stress granule	1.83E-03
11	GO:0000502: proteasome complex	2.08E-03
12	GO:0005635: nuclear envelope	2.23E-03
13	GO:0048471: perinuclear region of cytoplasm	2.51E-03
14	GO:0005765: lysosomal membrane	2.51E-03
15	GO:0005773: vacuole	2.83E-03
16	GO:0005750: mitochondrial respiratory chain complex III	3.25E-03
17	GO:0005839: proteasome core complex	4.63E-03
18	GO:0005777: peroxisome	5.74E-03
19	GO:0000145: exocyst	7.89E-03
20	GO:0005802: trans-Golgi network	8.76E-03
21	GO:0005886: plasma membrane	8.97E-03
22	GO:0000932: P-body	9.74E-03
23	GO:0005788: endoplasmic reticulum lumen	1.01E-02
24	GO:0005768: endosome	1.03E-02
25	GO:0005643: nuclear pore	1.17E-02
26	GO:0000325: plant-type vacuole	1.30E-02
27	GO:0005743: mitochondrial inner membrane	1.33E-02
28	GO:0005783: endoplasmic reticulum	1.55E-02
29	GO:0005774: vacuolar membrane	1.65E-02
30	GO:0090406: pollen tube	1.66E-02
31	GO:0005856: cytoskeleton	1.80E-02
32	GO:0005618: cell wall	2.02E-02
33	GO:0005834: heterotrimeric G-protein complex	2.42E-02
34	GO:0009524: phragmoplast	3.21E-02
35	GO:0009507: chloroplast	3.41E-02
36	GO:0005759: mitochondrial matrix	3.64E-02
37	GO:0005737: cytoplasm	4.12E-02
38	GO:0009506: plasmodesma	4.50E-02