gene detail

Gene description

TAIR ID: AT5G55700

Short description: beta-amylase 4

Pathogen responsiveness: -1.33

General responsiveness: -2.23

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

starch catabolic process, polysaccharide catabolic process

GO cellular component

chloroplast

GO molecular function

beta-amylase activity, amylopectin maltohydrolase activity

Protein domain

Pfam	PF01373, Glycosyl hydrolase family 14

Metabolic pathway

PWY-6724: starch degradation II

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.65	4.66E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.83	2.83E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.39	1.13E-09