gene detail

Gene description

TAIR ID: AT5G55250

Short description: IAA carboxylmethyltransferase 1

Pathogen responsiveness: -1.22

General responsiveness: -1.11

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

methylation, polarity specification of adaxial/abaxial axis, auxin homeostasis

GO cellular component

cellular_component

GO molecular function

identical protein binding, indole acetic acid carboxyl methyltransferase activity, indole-3-acetate carboxyl methyltransferase activity, magnesium ion binding, S-adenosylmethionine-dependent methyltransferase activity

Protein domain

Pfam	PF03492, SAM dependent carboxyl methyltransferase

Metabolic pathway

PWY-6303: methyl indole-3-acetate interconversion
PWY-6477: gibberellin inactivation II (methylation)
PWY0A-6303: methyl indole-3-acetate interconversion

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.88	1.28E-03
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.92	8.05E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.25	2.81E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.82	4.69E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.84	2.64E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.68	1.17E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.18	7.48E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.94	2.63E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.70	8.15E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.92	2.92E-06
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	-1.65	2.37E-04