gene detail

Gene description

TAIR ID: AT5G54130

Short description: Calcium-binding endonuclease/exonuclease/phosphatase family

Pathogen responsiveness: -0.42

General responsiveness: 0.57

Orthologous

Rice:

OS10G0203000

Maize:

GRMZM2G048205

Wheat:

TAAFFX.24399.1.S1_AT

GO biological process

unkown

GO cellular component

unkown

GO molecular function

calcium ion binding, exonuclease activity, endonuclease activity

Protein domain

Pfam	PF03372, Endonuclease/Exonuclease/phosphatase family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.70	3.68E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.88	1.10E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-1.50	8.97E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.79	2.23E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-2.15	4.87E-11
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-3.31	5.09E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-3.52	1.90E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.45	1.09E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	2.60	7.05E-03