co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
2	GO:0010243: response to organonitrogen compound	0.00E+00
3	GO:0009856: pollination	0.00E+00
4	GO:0007623: circadian rhythm	9.82E-08
5	GO:0042754: negative regulation of circadian rhythm	2.93E-07
6	GO:0010100: negative regulation of photomorphogenesis	3.55E-07
7	GO:0071483: cellular response to blue light	5.16E-06
8	GO:0009909: regulation of flower development	1.17E-05
9	GO:0048574: long-day photoperiodism, flowering	4.37E-05
10	GO:1903409: reactive oxygen species biosynthetic process	7.23E-05
11	GO:0000305: response to oxygen radical	7.23E-05
12	GO:0006898: receptor-mediated endocytosis	1.74E-04
13	GO:0043496: regulation of protein homodimerization activity	1.74E-04
14	GO:0043100: pyrimidine nucleobase salvage	1.74E-04
15	GO:1902066: regulation of cell wall pectin metabolic process	1.74E-04
16	GO:0051511: negative regulation of unidimensional cell growth	1.74E-04
17	GO:0071230: cellular response to amino acid stimulus	2.93E-04
18	GO:0016570: histone modification	2.93E-04
19	GO:0019419: sulfate reduction	2.93E-04
20	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.23E-04
21	GO:0010600: regulation of auxin biosynthetic process	5.65E-04
22	GO:0006749: glutathione metabolic process	5.65E-04
23	GO:0009902: chloroplast relocation	5.65E-04
24	GO:0009739: response to gibberellin	7.07E-04
25	GO:0009904: chloroplast accumulation movement	7.14E-04
26	GO:0010236: plastoquinone biosynthetic process	7.14E-04
27	GO:0009903: chloroplast avoidance movement	1.04E-03
28	GO:0019745: pentacyclic triterpenoid biosynthetic process	1.21E-03
29	GO:0070370: cellular heat acclimation	1.21E-03
30	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.21E-03
31	GO:0006368: transcription elongation from RNA polymerase II promoter	1.21E-03
32	GO:0009723: response to ethylene	1.26E-03
33	GO:0080167: response to karrikin	1.37E-03
34	GO:0030091: protein repair	1.40E-03
35	GO:0031540: regulation of anthocyanin biosynthetic process	1.40E-03
36	GO:0009640: photomorphogenesis	1.51E-03
37	GO:0045454: cell redox homeostasis	1.72E-03
38	GO:0009821: alkaloid biosynthetic process	1.80E-03
39	GO:0009835: fruit ripening	1.80E-03
40	GO:0009751: response to salicylic acid	2.20E-03
41	GO:0000103: sulfate assimilation	2.23E-03
42	GO:0051555: flavonol biosynthetic process	2.23E-03
43	GO:0009753: response to jasmonic acid	2.45E-03
44	GO:0000272: polysaccharide catabolic process	2.46E-03
45	GO:0006816: calcium ion transport	2.46E-03
46	GO:0006355: regulation of transcription, DNA-templated	2.57E-03
47	GO:0009624: response to nematode	2.86E-03
48	GO:0009785: blue light signaling pathway	2.94E-03
49	GO:0007015: actin filament organization	3.19E-03
50	GO:0051017: actin filament bundle assembly	3.98E-03
51	GO:0019344: cysteine biosynthetic process	3.98E-03
52	GO:0006351: transcription, DNA-templated	4.15E-03
53	GO:0008299: isoprenoid biosynthetic process	4.26E-03
54	GO:0006874: cellular calcium ion homeostasis	4.26E-03
55	GO:0009416: response to light stimulus	4.63E-03
56	GO:0010017: red or far-red light signaling pathway	4.83E-03
57	GO:0055114: oxidation-reduction process	5.11E-03
58	GO:0040007: growth	5.13E-03
59	GO:0010468: regulation of gene expression	5.86E-03
60	GO:0048653: anther development	6.05E-03
61	GO:0042631: cellular response to water deprivation	6.05E-03
62	GO:0010182: sugar mediated signaling pathway	6.38E-03
63	GO:0009741: response to brassinosteroid	6.38E-03
64	GO:0042752: regulation of circadian rhythm	6.70E-03
65	GO:0009851: auxin biosynthetic process	7.04E-03
66	GO:0009658: chloroplast organization	7.59E-03
67	GO:0009630: gravitropism	7.72E-03
68	GO:0006464: cellular protein modification process	8.43E-03
69	GO:0009567: double fertilization forming a zygote and endosperm	8.43E-03
70	GO:0016126: sterol biosynthetic process	9.54E-03
71	GO:0042128: nitrate assimilation	1.03E-02
72	GO:0015995: chlorophyll biosynthetic process	1.07E-02
73	GO:0045892: negative regulation of transcription, DNA-templated	1.15E-02
74	GO:0018298: protein-chromophore linkage	1.15E-02
75	GO:0009813: flavonoid biosynthetic process	1.19E-02
76	GO:0006811: ion transport	1.23E-02
77	GO:0009733: response to auxin	1.31E-02
78	GO:0006865: amino acid transport	1.32E-02
79	GO:0016042: lipid catabolic process	1.35E-02
80	GO:0045087: innate immune response	1.36E-02
81	GO:0009651: response to salt stress	1.51E-02
82	GO:0008152: metabolic process	1.54E-02
83	GO:0006855: drug transmembrane transport	1.81E-02
84	GO:0046686: response to cadmium ion	1.99E-02
85	GO:0009585: red, far-red light phototransduction	2.01E-02
86	GO:0006813: potassium ion transport	2.01E-02
87	GO:0010224: response to UV-B	2.06E-02
88	GO:0006857: oligopeptide transport	2.11E-02
89	GO:0035556: intracellular signal transduction	2.62E-02
90	GO:0045893: positive regulation of transcription, DNA-templated	2.84E-02
91	GO:0009737: response to abscisic acid	2.94E-02
92	GO:0009058: biosynthetic process	3.15E-02
93	GO:0045490: pectin catabolic process	3.81E-02
94	GO:0010228: vegetative to reproductive phase transition of meristem	3.94E-02

Rank	GO Term	Adjusted P value
1	GO:0000250: lanosterol synthase activity	0.00E+00
2	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
3	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
4	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
5	GO:0000989: transcription factor activity, transcription factor binding	5.06E-07
6	GO:0008106: alcohol dehydrogenase (NADP+) activity	2.69E-06
7	GO:0008066: glutamate receptor activity	7.23E-05
8	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	7.23E-05
9	GO:0001530: lipopolysaccharide binding	7.23E-05
10	GO:0019904: protein domain specific binding	9.43E-05
11	GO:0009973: adenylyl-sulfate reductase activity	1.74E-04
12	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	1.74E-04
13	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	1.74E-04
14	GO:0004362: glutathione-disulfide reductase activity	1.74E-04
15	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	1.74E-04
16	GO:0015173: aromatic amino acid transmembrane transporter activity	1.74E-04
17	GO:0050347: trans-octaprenyltranstransferase activity	1.74E-04
18	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	1.74E-04
19	GO:0003913: DNA photolyase activity	2.93E-04
20	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	2.93E-04
21	GO:0015175: neutral amino acid transmembrane transporter activity	4.23E-04
22	GO:0004506: squalene monooxygenase activity	5.65E-04
23	GO:0016866: intramolecular transferase activity	5.65E-04
24	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.14E-04
25	GO:0045431: flavonol synthase activity	7.14E-04
26	GO:0000210: NAD+ diphosphatase activity	8.73E-04
27	GO:0004866: endopeptidase inhibitor activity	8.73E-04
28	GO:0004709: MAP kinase kinase kinase activity	8.73E-04
29	GO:0016161: beta-amylase activity	1.04E-03
30	GO:0008270: zinc ion binding	1.14E-03
31	GO:0009881: photoreceptor activity	1.21E-03
32	GO:0030674: protein binding, bridging	1.40E-03
33	GO:0016844: strictosidine synthase activity	2.01E-03
34	GO:0005262: calcium channel activity	2.94E-03
35	GO:0005217: intracellular ligand-gated ion channel activity	3.44E-03
36	GO:0004970: ionotropic glutamate receptor activity	3.44E-03
37	GO:0016491: oxidoreductase activity	3.66E-03
38	GO:0008324: cation transmembrane transporter activity	4.26E-03
39	GO:0030570: pectate lyase activity	5.13E-03
40	GO:0042802: identical protein binding	6.23E-03
41	GO:0010181: FMN binding	6.70E-03
42	GO:0016788: hydrolase activity, acting on ester bonds	7.73E-03
43	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.07E-03
44	GO:0050660: flavin adenine dinucleotide binding	8.78E-03
45	GO:0052689: carboxylic ester hydrolase activity	1.04E-02
46	GO:0004871: signal transducer activity	1.18E-02
47	GO:0015238: drug transmembrane transporter activity	1.19E-02
48	GO:0005215: transporter activity	1.29E-02
49	GO:0003677: DNA binding	1.39E-02
50	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.45E-02
51	GO:0050661: NADP binding	1.49E-02
52	GO:0009055: electron carrier activity	1.50E-02
53	GO:0015293: symporter activity	1.77E-02
54	GO:0016298: lipase activity	2.06E-02
55	GO:0015171: amino acid transmembrane transporter activity	2.16E-02
56	GO:0015035: protein disulfide oxidoreductase activity	2.64E-02
57	GO:0016787: hydrolase activity	2.96E-02
58	GO:0015297: antiporter activity	3.69E-02
59	GO:0046872: metal ion binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0031313: extrinsic component of endosome membrane	0.00E+00
2	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	7.23E-05
3	GO:0009526: plastid envelope	5.65E-04
4	GO:0016593: Cdc73/Paf1 complex	5.65E-04
5	GO:0031982: vesicle	1.40E-03
6	GO:0005884: actin filament	2.46E-03
7	GO:0005578: proteinaceous extracellular matrix	2.94E-03
8	GO:0031012: extracellular matrix	2.94E-03
9	GO:0031969: chloroplast membrane	9.41E-03
10	GO:0005834: heterotrimeric G-protein complex	2.37E-02
11	GO:0005777: peroxisome	2.84E-02
12	GO:0009543: chloroplast thylakoid lumen	3.03E-02
13	GO:0005615: extracellular space	4.13E-02
14	GO:0046658: anchored component of plasma membrane	4.65E-02