Gene: AT5G53880
     

Gene description


TAIR ID: AT5G53880

No short description

Pathogen responsiveness: 0.59

General responsiveness: 0.40

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


plasma membrane, mitochondrion


GO molecular function


molecular_function


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


28 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.941.11E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.652.83E-02
GSE17464Laer, controlLaer, Flg22 2 h-2.593.05E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.691.90E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.955.15E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.023.44E-02
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.765.37E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.191.90E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.108.74E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.667.99E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.851.65E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.431.98E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.731.77E-06
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.655.58E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.232.55E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.225.47E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.746.33E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.982.28E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.532.06E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.866.39E-11
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.192.72E-13
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.165.18E-13
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.107.72E-13
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.001.37E-11
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.561.52E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.651.18E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.015.89E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.716.65E-05






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.