Gene: AT5G52570
     

Gene description


TAIR ID: AT5G52570

Short description: beta-carotene hydroxylase 2

Pathogen responsiveness: 0.40

General responsiveness: 2.11

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G164318  

Wheat: No orthologous gene

GO biological process


xanthophyll biosynthetic process, carotene metabolic process, oxidation-reduction process


GO cellular component


chloroplast membrane, chloroplast, integral component of membrane


GO molecular function


carotene beta-ring hydroxylase activity, hydrolase activity, oxidoreductase activity, iron ion binding


Protein domain


PfamPF04116, Fatty acid hydroxylase superfamily

Transcriptional regulation


Regulator:
AT5G11260, AT5G49450, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.627.18E-05
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.001.06E-03
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.421.49E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.821.05E-03
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-2.264.27E-02
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-2.522.16E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-4.557.37E-16
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-4.905.13E-17
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-4.712.99E-16
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-4.729.77E-17
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.487.88E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.611.19E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.573.04E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.908.54E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.761.93E-10
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.148.37E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.133.50E-05
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h-2.443.15E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-3.156.44E-07






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