Gene: AT5G51910
     


Gene description


TAIR ID: AT5G51910

Short description: TCP family transcription factor

Pathogen responsiveness: -1.30

General responsiveness: -2.15

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of defense response, regulation of transcription


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF03634, TCP family transcription factor

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 49 (Top5%)

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.562.09E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.641.69E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.931.41E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.718.75E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.901.43E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.721.62E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.891.19E-12
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.643.36E-05






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.