Gene: AT5G51790
     

Gene description


TAIR ID: AT5G51790

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


protein dimerization activity, transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.214.14E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.682.22E-04
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-3.774.53E-06
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.557.65E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.661.41E-09
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.511.62E-08






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.