gene detail

Gene description

TAIR ID: AT5G51120

Short description: polyadenylate-binding protein 1

Pathogen responsiveness: -2.98

General responsiveness: -2.51

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

mRNA processing

GO cellular component

cytosol, cytoplasm, integral component of membrane, nuclear speck

GO molecular function

RNA binding, protein binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03015: mRNA surveillance pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G16110, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition