Gene: AT5G50915
     


Gene description


TAIR ID: AT5G50915

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 0.09

General responsiveness: 1.16

Orthologous


Rice: No orthologous gene
Maize:

GRMZM5G882527  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription, response to gibberellin


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding, DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h-1.984.33E-03
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h-2.287.65E-04
GSE11807Col, erf104 ko, water 4 hCol, erf104 ko, Flg22 4 h-1.502.47E-02
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h-1.651.67E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.822.70E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.154.19E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.891.00E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.641.96E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.567.16E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.899.64E-04
GSE21920Col, WT, mockCol, WT, Pto 6 h-1.973.35E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.771.79E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.961.32E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-1.719.94E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.709.15E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.564.09E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.041.29E-08
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.691.02E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.485.32E-11
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.961.54E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.592.86E-07
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.581.48E-03
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h-1.935.31E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-2.081.38E-04
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h-1.691.41E-05
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.841.77E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.671.18E-05






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