Gene: AT5G50280
Gene description
TAIR ID: AT5G50280
Short description: Pentatricopeptide repeat (PPR) superfamily protein
Pathogen responsiveness: -0.70
General responsiveness: -0.07
GO biological process
RNA modification, embryo development ending in seed dormancy
GO cellular component
intracellular membrane-bounded organelle, chloroplast
GO molecular function
RNA binding, endonuclease activity
Protein domain
| Pfam | PF01535, PPR repeat |
| Pfam | PF13812, Pentatricopeptide repeat domain |
| Pfam | PF13041, PPR repeat family |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
9 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -1.54 | 2.94E-10 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | -1.71 | 3.18E-06 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.57 | 4.17E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.92 | 2.71E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.71 | 1.81E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.92 | 2.24E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.91 | 9.98E-14 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.94 | 4.68E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -1.65 | 1.99E-06 |
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