Gene: AT5G50250
     


Gene description


TAIR ID: AT5G50250

Short description: chloroplast RNA-binding protein 31B

Pathogen responsiveness: -1.15

General responsiveness: 0.51

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


RNA modification, innate immune response, mRNA processing


GO cellular component


chloroplast envelope, chloroplast stroma, intracellular ribonucleoprotein complex, chloroplast


GO molecular function


unkown


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.558.12E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.581.27E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.974.52E-10
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.173.10E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.875.24E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.643.88E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.751.31E-11
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.671.03E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.