gene detail

Gene description

TAIR ID: AT5G49760

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -1.29

General responsiveness: -0.54

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

plasma membrane, extracellular region, vacuole

GO molecular function

kinase activity

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 36 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.60	6.09E-06
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	2.03	1.11E-12
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	1.53	1.07E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.64	6.38E-13