Gene: AT5G49480
     

Gene description


TAIR ID: AT5G49480

Short description: Ca2+-binding protein 1

Pathogen responsiveness: 0.76

General responsiveness: 0.73

Orthologous


Rice:

OS03G0310800  

Maize:

GRMZM2G033846  

Wheat: No orthologous gene

GO biological process


hyperosmotic salinity response


GO cellular component


cytosol, cytoplasm


GO molecular function


unkown


Protein domain


PfamPF13499, EF-hand domain pair
SMARTSM00054, EFh

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


30 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h1.981.22E-02
GSE12856Col, WT, controlCol, WT, Bg h2.072.55E-05
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.761.59E-10
GSE17464Laer, controlLaer, PstDC3000 12 h-1.751.69E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.597.09E-05
GSE17464Penta, controlPenta, PstDC3000 12 h-1.741.35E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.901.99E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.671.72E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.671.54E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.252.78E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.657.21E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.431.13E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.956.22E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.531.54E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.761.54E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.211.31E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.688.54E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.525.23E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.941.15E-07
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h1.868.94E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.331.57E-05
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.813.16E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.526.51E-04
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.531.06E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.573.20E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.765.60E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.901.36E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.262.67E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.193.83E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min4.561.35E-04






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