Gene: AT5G49160
     

Gene description


TAIR ID: AT5G49160

Short description: methyltransferase 1

Pathogen responsiveness: -1.07

General responsiveness: -1.69

GO biological process


zygote asymmetric cytokinesis in embryo sac, regulation of gene expression by genetic imprinting, DNA methylation on cytosine within a CG sequence, covalent chromatin modification, negative regulation of flower development, maintenance of DNA methylation, DNA mediated transformation, C-5 methylation of cytosine


GO cellular component


nucleus


GO molecular function


DNA binding, chromatin binding, DNA (cytosine-5-)-methyltransferase activity, methyltransferase activity


Protein domain


PfamPF00145, C-5 cytosine-specific DNA methylase
PfamPF01426, BAH domain
PfamPF12047, Cytosine specific DNA methyltransferase replication foci domain
SMARTSM00439, BAH

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G36010, AT5G02470, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.711.12E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.982.45E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.922.08E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.531.43E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.392.54E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.128.80E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.652.04E-13






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