Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G49160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048263: determination of dorsal identity0.00E+00
2GO:0060966: regulation of gene silencing by RNA0.00E+00
3GO:0070829: heterochromatin maintenance0.00E+00
4GO:0071360: cellular response to exogenous dsRNA0.00E+00
5GO:1901333: positive regulation of lateral root development0.00E+00
6GO:1900370: positive regulation of RNA interference0.00E+00
7GO:0035563: positive regulation of chromatin binding0.00E+00
8GO:0010376: stomatal complex formation8.12E-06
9GO:0090610: bundle sheath cell fate specification8.12E-06
10GO:0050891: multicellular organismal water homeostasis8.12E-06
11GO:1900368: regulation of RNA interference8.12E-06
12GO:0009629: response to gravity2.19E-05
13GO:0097054: L-glutamate biosynthetic process2.19E-05
14GO:1900111: positive regulation of histone H3-K9 dimethylation2.19E-05
15GO:0061087: positive regulation of histone H3-K27 methylation2.19E-05
16GO:0010235: guard mother cell cytokinesis2.19E-05
17GO:1902806: regulation of cell cycle G1/S phase transition3.99E-05
18GO:0090436: leaf pavement cell development3.99E-05
19GO:0032776: DNA methylation on cytosine3.99E-05
20GO:0060968: regulation of gene silencing3.99E-05
21GO:0006537: glutamate biosynthetic process6.14E-05
22GO:0060964: regulation of gene silencing by miRNA6.14E-05
23GO:0009855: determination of bilateral symmetry6.14E-05
24GO:1901002: positive regulation of response to salt stress8.58E-05
25GO:0019676: ammonia assimilation cycle8.58E-05
26GO:1902584: positive regulation of response to water deprivation8.58E-05
27GO:0010014: meristem initiation1.71E-04
28GO:0009554: megasporogenesis1.71E-04
29GO:2000037: regulation of stomatal complex patterning1.71E-04
30GO:0080060: integument development1.71E-04
31GO:0010444: guard mother cell differentiation2.04E-04
32GO:0030091: protein repair2.37E-04
33GO:0032875: regulation of DNA endoreduplication2.37E-04
34GO:0070413: trehalose metabolism in response to stress2.37E-04
35GO:0010052: guard cell differentiation2.71E-04
36GO:0010233: phloem transport2.71E-04
37GO:0048589: developmental growth3.07E-04
38GO:0030422: production of siRNA involved in RNA interference3.81E-04
39GO:0010075: regulation of meristem growth4.98E-04
40GO:0009887: animal organ morphogenesis5.39E-04
41GO:0080188: RNA-directed DNA methylation5.80E-04
42GO:0005992: trehalose biosynthetic process6.66E-04
43GO:0010073: meristem maintenance7.09E-04
44GO:0051321: meiotic cell cycle7.53E-04
45GO:0006306: DNA methylation7.53E-04
46GO:0080022: primary root development9.85E-04
47GO:0010051: xylem and phloem pattern formation9.85E-04
48GO:0010087: phloem or xylem histogenesis9.85E-04
49GO:0045489: pectin biosynthetic process1.03E-03
50GO:0010305: leaf vascular tissue pattern formation1.03E-03
51GO:0009734: auxin-activated signaling pathway1.30E-03
52GO:0006464: cellular protein modification process1.34E-03
53GO:0042128: nitrate assimilation1.62E-03
54GO:0007568: aging1.97E-03
55GO:0000724: double-strand break repair via homologous recombination2.04E-03
56GO:0016051: carbohydrate biosynthetic process2.10E-03
57GO:0009926: auxin polar transport2.49E-03
58GO:0009965: leaf morphogenesis2.69E-03
59GO:0009553: embryo sac development3.78E-03
60GO:0009742: brassinosteroid mediated signaling pathway4.02E-03
61GO:0009845: seed germination4.75E-03
62GO:0009737: response to abscisic acid6.85E-03
63GO:0048366: leaf development8.51E-03
64GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.03E-03
65GO:0006357: regulation of transcription from RNA polymerase II promoter1.41E-02
66GO:0006351: transcription, DNA-templated1.51E-02
67GO:0009908: flower development1.62E-02
68GO:0009735: response to cytokinin1.63E-02
69GO:0006355: regulation of transcription, DNA-templated2.79E-02
70GO:0071555: cell wall organization2.88E-02
71GO:0030154: cell differentiation3.06E-02
72GO:0009733: response to auxin3.13E-02
73GO:0005975: carbohydrate metabolic process3.88E-02
74GO:0046686: response to cadmium ion3.95E-02
RankGO TermAdjusted P value
1GO:0016040: glutamate synthase (NADH) activity0.00E+00
2GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity8.12E-06
3GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity6.14E-05
4GO:0016279: protein-lysine N-methyltransferase activity8.58E-05
5GO:0051538: 3 iron, 4 sulfur cluster binding1.12E-04
6GO:0004805: trehalose-phosphatase activity3.81E-04
7GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity7.99E-04
8GO:0018024: histone-lysine N-methyltransferase activity9.38E-04
9GO:0010181: FMN binding1.08E-03
10GO:0004650: polygalacturonase activity3.63E-03
11GO:0004386: helicase activity4.10E-03
12GO:0016829: lyase activity4.75E-03
13GO:0003677: DNA binding4.79E-03
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.35E-03
15GO:0050660: flavin adenine dinucleotide binding8.41E-03
16GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.00E-02
17GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.08E-02
18GO:0016757: transferase activity, transferring glycosyl groups1.09E-02
19GO:0003700: transcription factor activity, sequence-specific DNA binding1.45E-02
20GO:0008289: lipid binding1.47E-02
21GO:0043565: sequence-specific DNA binding1.65E-02
22GO:0000166: nucleotide binding1.74E-02
23GO:0016740: transferase activity2.01E-02
24GO:0005506: iron ion binding2.85E-02
25GO:0044212: transcription regulatory region DNA binding2.88E-02
26GO:0046983: protein dimerization activity3.54E-02
27GO:0005515: protein binding4.19E-02
RankGO TermAdjusted P value
1GO:0090577: RNA polymerase IV transcription factor complex0.00E+00
2GO:0031618: nuclear pericentric heterochromatin0.00E+00
3GO:0005875: microtubule associated complex6.22E-04
4GO:0000419: DNA-directed RNA polymerase V complex6.22E-04
5GO:0000775: chromosome, centromeric region7.99E-04
6GO:0005802: trans-Golgi network2.57E-03
7GO:0005768: endosome2.91E-03
8GO:0010008: endosome membrane3.48E-03
9GO:0000139: Golgi membrane4.36E-03
10GO:0080008: Cul4-RING E3 ubiquitin ligase complex8.10E-03
11GO:0009536: plastid3.33E-02
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Gene type



Gene DE type