gene detail

Gene description

TAIR ID: AT5G47420

Short description: Tryptophan RNA-binding attenuator protein-like

Pathogen responsiveness: -0.71

General responsiveness: -2.21

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

GO biological process

biological_process

GO cellular component

integral component of membrane, endoplasmic reticulum, chloroplast

GO molecular function

molecular_function

Protein domain

Pfam	PF01987, Mitochondrial biogenesis AIM24

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G73805, AT5G26920

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 18 (Top10%)

Coexpression network

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.44	1.49E-03
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	1.59	4.81E-02
GSE17464	Laer, control	Laer, Flg22 2 h	1.52	1.54E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.87	1.17E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.62	5.80E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.76	2.24E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.34	3.67E-15
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	1.68	7.11E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.56	3.37E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.65	1.84E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.75	8.09E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.92	9.79E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	1.90	1.89E-05