co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G47420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0039694: viral RNA genome replication	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:0006592: ornithine biosynthetic process	0.00E+00
4	GO:0006102: isocitrate metabolic process	1.03E-08
5	GO:0006099: tricarboxylic acid cycle	3.14E-08
6	GO:0006457: protein folding	5.64E-08
7	GO:0045454: cell redox homeostasis	1.45E-07
8	GO:0046686: response to cadmium ion	3.71E-07
9	GO:0034976: response to endoplasmic reticulum stress	4.12E-07
10	GO:0006101: citrate metabolic process	1.22E-06
11	GO:0072334: UDP-galactose transmembrane transport	1.06E-05
12	GO:0006465: signal peptide processing	3.21E-05
13	GO:0006097: glyoxylate cycle	3.21E-05
14	GO:0043248: proteasome assembly	4.79E-05
15	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	6.70E-05
16	GO:1990641: response to iron ion starvation	1.58E-04
17	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.58E-04
18	GO:0006007: glucose catabolic process	1.58E-04
19	GO:0003400: regulation of COPII vesicle coating	1.58E-04
20	GO:0019673: GDP-mannose metabolic process	1.58E-04
21	GO:0046244: salicylic acid catabolic process	1.58E-04
22	GO:0006390: transcription from mitochondrial promoter	1.58E-04
23	GO:0048448: stamen morphogenesis	1.58E-04
24	GO:0006772: thiamine metabolic process	1.58E-04
25	GO:0034975: protein folding in endoplasmic reticulum	1.58E-04
26	GO:0035266: meristem growth	1.58E-04
27	GO:0010450: inflorescence meristem growth	1.58E-04
28	GO:0007292: female gamete generation	1.58E-04
29	GO:0051938: L-glutamate import	1.58E-04
30	GO:0015760: glucose-6-phosphate transport	1.58E-04
31	GO:0043067: regulation of programmed cell death	2.12E-04
32	GO:0009651: response to salt stress	2.81E-04
33	GO:0007051: spindle organization	3.60E-04
34	GO:0051788: response to misfolded protein	3.60E-04
35	GO:0019752: carboxylic acid metabolic process	3.60E-04
36	GO:0015712: hexose phosphate transport	3.60E-04
37	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.60E-04
38	GO:0008535: respiratory chain complex IV assembly	3.60E-04
39	GO:0043091: L-arginine import	3.60E-04
40	GO:0048833: specification of floral organ number	3.60E-04
41	GO:0006511: ubiquitin-dependent protein catabolic process	3.73E-04
42	GO:0090351: seedling development	4.83E-04
43	GO:0015714: phosphoenolpyruvate transport	5.89E-04
44	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.89E-04
45	GO:0035436: triose phosphate transmembrane transport	5.89E-04
46	GO:0045039: protein import into mitochondrial inner membrane	5.89E-04
47	GO:0060968: regulation of gene silencing	5.89E-04
48	GO:0006486: protein glycosylation	7.52E-04
49	GO:0042823: pyridoxal phosphate biosynthetic process	8.43E-04
50	GO:0001676: long-chain fatty acid metabolic process	8.43E-04
51	GO:0002239: response to oomycetes	8.43E-04
52	GO:0006979: response to oxidative stress	8.50E-04
53	GO:0009555: pollen development	9.46E-04
54	GO:1902584: positive regulation of response to water deprivation	1.12E-03
55	GO:0033356: UDP-L-arabinose metabolic process	1.12E-03
56	GO:0051205: protein insertion into membrane	1.12E-03
57	GO:0015713: phosphoglycerate transport	1.12E-03
58	GO:0010109: regulation of photosynthesis	1.12E-03
59	GO:0045927: positive regulation of growth	1.41E-03
60	GO:0009697: salicylic acid biosynthetic process	1.41E-03
61	GO:0006090: pyruvate metabolic process	1.41E-03
62	GO:0046283: anthocyanin-containing compound metabolic process	1.41E-03
63	GO:0009229: thiamine diphosphate biosynthetic process	1.41E-03
64	GO:0006461: protein complex assembly	1.41E-03
65	GO:0007029: endoplasmic reticulum organization	1.41E-03
66	GO:0006405: RNA export from nucleus	1.41E-03
67	GO:0042176: regulation of protein catabolic process	1.74E-03
68	GO:0006796: phosphate-containing compound metabolic process	1.74E-03
69	GO:0000060: protein import into nucleus, translocation	1.74E-03
70	GO:0009643: photosynthetic acclimation	1.74E-03
71	GO:0006014: D-ribose metabolic process	1.74E-03
72	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.74E-03
73	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.74E-03
74	GO:0048827: phyllome development	1.74E-03
75	GO:0048232: male gamete generation	1.74E-03
76	GO:0034389: lipid particle organization	2.09E-03
77	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.09E-03
78	GO:0080186: developmental vegetative growth	2.45E-03
79	GO:0042773: ATP synthesis coupled electron transport	2.45E-03
80	GO:0000082: G1/S transition of mitotic cell cycle	2.45E-03
81	GO:0010078: maintenance of root meristem identity	2.84E-03
82	GO:0006499: N-terminal protein myristoylation	2.90E-03
83	GO:0010043: response to zinc ion	3.04E-03
84	GO:0009880: embryonic pattern specification	3.25E-03
85	GO:0006526: arginine biosynthetic process	3.25E-03
86	GO:0010204: defense response signaling pathway, resistance gene-independent	3.25E-03
87	GO:0030968: endoplasmic reticulum unfolded protein response	3.25E-03
88	GO:0045087: innate immune response	3.33E-03
89	GO:0009853: photorespiration	3.33E-03
90	GO:0010205: photoinhibition	4.12E-03
91	GO:0000103: sulfate assimilation	4.58E-03
92	GO:0048829: root cap development	4.58E-03
93	GO:0009965: leaf morphogenesis	4.82E-03
94	GO:0006855: drug transmembrane transport	5.00E-03
95	GO:0009807: lignan biosynthetic process	5.05E-03
96	GO:0010015: root morphogenesis	5.05E-03
97	GO:0006790: sulfur compound metabolic process	5.55E-03
98	GO:0006108: malate metabolic process	6.06E-03
99	GO:0009933: meristem structural organization	6.59E-03
100	GO:0006096: glycolytic process	6.82E-03
101	GO:0070588: calcium ion transmembrane transport	7.13E-03
102	GO:0046854: phosphatidylinositol phosphorylation	7.13E-03
103	GO:0006071: glycerol metabolic process	7.69E-03
104	GO:0009553: embryo sac development	7.97E-03
105	GO:0009624: response to nematode	8.21E-03
106	GO:0006487: protein N-linked glycosylation	8.27E-03
107	GO:0009751: response to salicylic acid	8.50E-03
108	GO:0009408: response to heat	8.66E-03
109	GO:0003333: amino acid transmembrane transport	9.46E-03
110	GO:0030433: ubiquitin-dependent ERAD pathway	1.01E-02
111	GO:0031348: negative regulation of defense response	1.01E-02
112	GO:0019748: secondary metabolic process	1.01E-02
113	GO:0009306: protein secretion	1.14E-02
114	GO:0051028: mRNA transport	1.20E-02
115	GO:0042742: defense response to bacterium	1.22E-02
116	GO:0008033: tRNA processing	1.27E-02
117	GO:0010501: RNA secondary structure unwinding	1.27E-02
118	GO:0010118: stomatal movement	1.27E-02
119	GO:0006520: cellular amino acid metabolic process	1.34E-02
120	GO:0006662: glycerol ether metabolic process	1.34E-02
121	GO:0048868: pollen tube development	1.34E-02
122	GO:0009749: response to glucose	1.48E-02
123	GO:0019252: starch biosynthetic process	1.48E-02
124	GO:0080156: mitochondrial mRNA modification	1.56E-02
125	GO:0002229: defense response to oomycetes	1.56E-02
126	GO:0000302: response to reactive oxygen species	1.56E-02
127	GO:0010193: response to ozone	1.56E-02
128	GO:0032502: developmental process	1.63E-02
129	GO:0007264: small GTPase mediated signal transduction	1.63E-02
130	GO:0030163: protein catabolic process	1.71E-02
131	GO:0006464: cellular protein modification process	1.78E-02
132	GO:0009567: double fertilization forming a zygote and endosperm	1.78E-02
133	GO:0010286: heat acclimation	1.86E-02
134	GO:0009615: response to virus	2.02E-02
135	GO:0009607: response to biotic stimulus	2.10E-02
136	GO:0006888: ER to Golgi vesicle-mediated transport	2.27E-02
137	GO:0006950: response to stress	2.27E-02
138	GO:0016311: dephosphorylation	2.36E-02
139	GO:0006952: defense response	2.36E-02
140	GO:0048481: plant ovule development	2.44E-02
141	GO:0030244: cellulose biosynthetic process	2.44E-02
142	GO:0008219: cell death	2.44E-02
143	GO:0009832: plant-type cell wall biogenesis	2.53E-02
144	GO:0010311: lateral root formation	2.53E-02
145	GO:0009407: toxin catabolic process	2.62E-02
146	GO:0016051: carbohydrate biosynthetic process	2.89E-02
147	GO:0034599: cellular response to oxidative stress	2.98E-02
148	GO:0006839: mitochondrial transport	3.17E-02
149	GO:0006631: fatty acid metabolic process	3.27E-02
150	GO:0009744: response to sucrose	3.46E-02
151	GO:0055114: oxidation-reduction process	3.56E-02
152	GO:0009644: response to high light intensity	3.66E-02
153	GO:0009636: response to toxic substance	3.76E-02
154	GO:0009846: pollen germination	4.07E-02
155	GO:0042538: hyperosmotic salinity response	4.07E-02
156	GO:0009793: embryo development ending in seed dormancy	4.22E-02
157	GO:0009809: lignin biosynthetic process	4.28E-02
158	GO:0051603: proteolysis involved in cellular protein catabolic process	4.38E-02
159	GO:0006417: regulation of translation	4.60E-02
160	GO:0048316: seed development	4.93E-02
161	GO:0048367: shoot system development	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0050220: prostaglandin-E synthase activity	0.00E+00
3	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
4	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
7	GO:0003756: protein disulfide isomerase activity	2.51E-08
8	GO:0051082: unfolded protein binding	4.92E-07
9	GO:0003994: aconitate hydratase activity	1.22E-06
10	GO:0051539: 4 iron, 4 sulfur cluster binding	1.44E-06
11	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.06E-05
12	GO:0005459: UDP-galactose transmembrane transporter activity	3.21E-05
13	GO:0016831: carboxy-lyase activity	8.96E-05
14	GO:0051669: fructan beta-fructosidase activity	1.58E-04
15	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.58E-04
16	GO:0005090: Sar guanyl-nucleotide exchange factor activity	1.58E-04
17	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.58E-04
18	GO:0004788: thiamine diphosphokinase activity	1.58E-04
19	GO:0031219: levanase activity	1.58E-04
20	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	1.58E-04
21	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.58E-04
22	GO:0004129: cytochrome-c oxidase activity	2.91E-04
23	GO:0005096: GTPase activator activity	2.91E-04
24	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.60E-04
25	GO:0019172: glyoxalase III activity	3.60E-04
26	GO:0015036: disulfide oxidoreductase activity	3.60E-04
27	GO:0048531: beta-1,3-galactosyltransferase activity	3.60E-04
28	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.60E-04
29	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	3.60E-04
30	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.60E-04
31	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.89E-04
32	GO:0071917: triose-phosphate transmembrane transporter activity	5.89E-04
33	GO:0000030: mannosyltransferase activity	5.89E-04
34	GO:0005093: Rab GDP-dissociation inhibitor activity	5.89E-04
35	GO:0008430: selenium binding	5.89E-04
36	GO:0000287: magnesium ion binding	6.88E-04
37	GO:0004298: threonine-type endopeptidase activity	7.18E-04
38	GO:0015181: arginine transmembrane transporter activity	8.43E-04
39	GO:0005460: UDP-glucose transmembrane transporter activity	8.43E-04
40	GO:0015189: L-lysine transmembrane transporter activity	8.43E-04
41	GO:0008233: peptidase activity	9.52E-04
42	GO:0005313: L-glutamate transmembrane transporter activity	1.12E-03
43	GO:0004470: malic enzyme activity	1.12E-03
44	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.12E-03
45	GO:0015120: phosphoglycerate transmembrane transporter activity	1.12E-03
46	GO:0004737: pyruvate decarboxylase activity	1.12E-03
47	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.12E-03
48	GO:0015035: protein disulfide oxidoreductase activity	1.20E-03
49	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.41E-03
50	GO:0005452: inorganic anion exchanger activity	1.41E-03
51	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.41E-03
52	GO:0000104: succinate dehydrogenase activity	1.41E-03
53	GO:0005496: steroid binding	1.41E-03
54	GO:0015301: anion:anion antiporter activity	1.41E-03
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.61E-03
56	GO:0016462: pyrophosphatase activity	1.74E-03
57	GO:0036402: proteasome-activating ATPase activity	1.74E-03
58	GO:0030976: thiamine pyrophosphate binding	1.74E-03
59	GO:0005507: copper ion binding	1.75E-03
60	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.09E-03
61	GO:0102391: decanoate--CoA ligase activity	2.09E-03
62	GO:0004747: ribokinase activity	2.09E-03
63	GO:0051020: GTPase binding	2.09E-03
64	GO:0051920: peroxiredoxin activity	2.09E-03
65	GO:0015297: antiporter activity	2.18E-03
66	GO:0004427: inorganic diphosphatase activity	2.45E-03
67	GO:0008320: protein transmembrane transporter activity	2.45E-03
68	GO:0004467: long-chain fatty acid-CoA ligase activity	2.45E-03
69	GO:0015238: drug transmembrane transporter activity	2.77E-03
70	GO:0008865: fructokinase activity	2.84E-03
71	GO:0016209: antioxidant activity	2.84E-03
72	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.67E-03
73	GO:0015174: basic amino acid transmembrane transporter activity	4.12E-03
74	GO:0030955: potassium ion binding	4.12E-03
75	GO:0004743: pyruvate kinase activity	4.12E-03
76	GO:0030234: enzyme regulator activity	4.58E-03
77	GO:0008171: O-methyltransferase activity	4.58E-03
78	GO:0051287: NAD binding	5.19E-03
79	GO:0015114: phosphate ion transmembrane transporter activity	6.06E-03
80	GO:0005388: calcium-transporting ATPase activity	6.06E-03
81	GO:0005315: inorganic phosphate transmembrane transporter activity	6.06E-03
82	GO:0017025: TBP-class protein binding	7.13E-03
83	GO:0004190: aspartic-type endopeptidase activity	7.13E-03
84	GO:0051536: iron-sulfur cluster binding	8.27E-03
85	GO:0003954: NADH dehydrogenase activity	8.27E-03
86	GO:0005509: calcium ion binding	1.08E-02
87	GO:0005524: ATP binding	1.20E-02
88	GO:0047134: protein-disulfide reductase activity	1.20E-02
89	GO:0008536: Ran GTPase binding	1.34E-02
90	GO:0010181: FMN binding	1.41E-02
91	GO:0004791: thioredoxin-disulfide reductase activity	1.41E-02
92	GO:0016853: isomerase activity	1.41E-02
93	GO:0048038: quinone binding	1.56E-02
94	GO:0008237: metallopeptidase activity	1.86E-02
95	GO:0051213: dioxygenase activity	2.02E-02
96	GO:0004004: ATP-dependent RNA helicase activity	2.27E-02
97	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.44E-02
98	GO:0050897: cobalt ion binding	2.71E-02
99	GO:0030145: manganese ion binding	2.71E-02
100	GO:0003697: single-stranded DNA binding	2.89E-02
101	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.89E-02
102	GO:0004364: glutathione transferase activity	3.36E-02
103	GO:0043621: protein self-association	3.66E-02
104	GO:0051537: 2 iron, 2 sulfur cluster binding	3.66E-02
105	GO:0005198: structural molecule activity	3.76E-02
106	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.28E-02
107	GO:0009055: electron carrier activity	4.32E-02
108	GO:0015171: amino acid transmembrane transporter activity	4.60E-02
109	GO:0008234: cysteine-type peptidase activity	4.60E-02
110	GO:0045735: nutrient reservoir activity	4.82E-02
111	GO:0005215: transporter activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0005783: endoplasmic reticulum	1.58E-13
4	GO:0005788: endoplasmic reticulum lumen	6.20E-09
5	GO:0000502: proteasome complex	4.36E-06
6	GO:0005829: cytosol	4.80E-06
7	GO:0030176: integral component of endoplasmic reticulum membrane	1.90E-05
8	GO:0030173: integral component of Golgi membrane	6.70E-05
9	GO:0005774: vacuolar membrane	7.68E-05
10	GO:0045252: oxoglutarate dehydrogenase complex	1.58E-04
11	GO:0005787: signal peptidase complex	1.58E-04
12	GO:0034245: mitochondrial DNA-directed RNA polymerase complex	1.58E-04
13	GO:0031090: organelle membrane	1.77E-04
14	GO:0008541: proteasome regulatory particle, lid subcomplex	2.91E-04
15	GO:0005739: mitochondrion	3.37E-04
16	GO:0031314: extrinsic component of mitochondrial inner membrane	3.60E-04
17	GO:0030134: ER to Golgi transport vesicle	3.60E-04
18	GO:0005789: endoplasmic reticulum membrane	5.29E-04
19	GO:0046861: glyoxysomal membrane	5.89E-04
20	GO:0005751: mitochondrial respiratory chain complex IV	5.89E-04
21	GO:0045271: respiratory chain complex I	6.55E-04
22	GO:0005839: proteasome core complex	7.18E-04
23	GO:0005747: mitochondrial respiratory chain complex I	9.62E-04
24	GO:0030660: Golgi-associated vesicle membrane	1.12E-03
25	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.12E-03
26	GO:0005886: plasma membrane	1.27E-03
27	GO:0008250: oligosaccharyltransferase complex	1.41E-03
28	GO:0005746: mitochondrial respiratory chain	1.41E-03
29	GO:0005743: mitochondrial inner membrane	1.57E-03
30	GO:0005801: cis-Golgi network	2.09E-03
31	GO:0031597: cytosolic proteasome complex	2.09E-03
32	GO:0031595: nuclear proteasome complex	2.45E-03
33	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.84E-03
34	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.84E-03
35	GO:0005811: lipid particle	3.25E-03
36	GO:0000326: protein storage vacuole	3.25E-03
37	GO:0009514: glyoxysome	3.25E-03
38	GO:0019773: proteasome core complex, alpha-subunit complex	3.25E-03
39	GO:0048046: apoplast	3.52E-03
40	GO:0008540: proteasome regulatory particle, base subcomplex	4.12E-03
41	GO:0005618: cell wall	4.25E-03
42	GO:0016020: membrane	5.01E-03
43	GO:0005765: lysosomal membrane	5.05E-03
44	GO:0031969: chloroplast membrane	5.28E-03
45	GO:0031966: mitochondrial membrane	5.38E-03
46	GO:0043234: protein complex	7.69E-03
47	GO:0005773: vacuole	7.97E-03
48	GO:0009505: plant-type cell wall	1.72E-02
49	GO:0009506: plasmodesma	2.32E-02
50	GO:0005643: nuclear pore	2.44E-02
51	GO:0009507: chloroplast	3.03E-02
52	GO:0016021: integral component of membrane	3.38E-02
53	GO:0005737: cytoplasm	3.85E-02
54	GO:0043231: intracellular membrane-bounded organelle	4.44E-02
55	GO:0005794: Golgi apparatus	4.48E-02