Gene: AT5G47200
Gene description
TAIR ID: AT5G47200
Short description: RAB GTPase homolog 1A
Pathogen responsiveness: -0.50
General responsiveness: -0.91
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
ER to Golgi vesicle-mediated transport, pollen tube growth, protein transport
GO cellular component
endoplasmic reticulum membrane, plasma membrane, Golgi membrane, Golgi apparatus
GO molecular function
GTPase activity, GTP binding
Protein domain
| Pfam | PF00071, Ras family |
| SMART | SM00174, RHO |
| SMART | SM00175, RAB |
| SMART | SM00173, RAS |
| SMART | SM00176, RAN |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
14 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 2.01 | 8.16E-07 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 1.57 | 9.78E-06 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 1.92 | 8.70E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 2.41 | 5.80E-13 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.72 | 1.00E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.60 | 2.23E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.80 | 4.80E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 2.60 | 1.81E-13 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.61 | 4.95E-11 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 2.20 | 1.42E-13 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 1.57 | 2.06E-03 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 1.63 | 1.78E-13 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.65 | 1.05E-02 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 1.54 | 1.18E-03 |
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