co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G47200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0071985: multivesicular body sorting pathway	0.00E+00
3	GO:0006216: cytidine catabolic process	0.00E+00
4	GO:0090400: stress-induced premature senescence	0.00E+00
5	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
6	GO:1904250: positive regulation of age-related resistance	0.00E+00
7	GO:0010398: xylogalacturonan metabolic process	0.00E+00
8	GO:0006102: isocitrate metabolic process	3.11E-06
9	GO:0006564: L-serine biosynthetic process	5.00E-05
10	GO:0006099: tricarboxylic acid cycle	5.94E-05
11	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.06E-04
12	GO:0042964: thioredoxin reduction	2.06E-04
13	GO:0006680: glucosylceramide catabolic process	2.06E-04
14	GO:1900384: regulation of flavonol biosynthetic process	2.06E-04
15	GO:0046686: response to cadmium ion	3.67E-04
16	GO:0071422: succinate transmembrane transport	4.62E-04
17	GO:0046939: nucleotide phosphorylation	4.62E-04
18	GO:0009805: coumarin biosynthetic process	4.62E-04
19	GO:0080026: response to indolebutyric acid	4.62E-04
20	GO:1902000: homogentisate catabolic process	4.62E-04
21	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.62E-04
22	GO:0015709: thiosulfate transport	4.62E-04
23	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.85E-04
24	GO:0009407: toxin catabolic process	5.03E-04
25	GO:0010102: lateral root morphogenesis	5.50E-04
26	GO:0006807: nitrogen compound metabolic process	5.50E-04
27	GO:0006517: protein deglycosylation	7.52E-04
28	GO:0010272: response to silver ion	7.52E-04
29	GO:0009072: aromatic amino acid family metabolic process	7.52E-04
30	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	7.52E-04
31	GO:0006556: S-adenosylmethionine biosynthetic process	7.52E-04
32	GO:0009062: fatty acid catabolic process	7.52E-04
33	GO:0072661: protein targeting to plasma membrane	7.52E-04
34	GO:0000162: tryptophan biosynthetic process	7.70E-04
35	GO:0006874: cellular calcium ion homeostasis	9.35E-04
36	GO:0015729: oxaloacetate transport	1.07E-03
37	GO:0080024: indolebutyric acid metabolic process	1.07E-03
38	GO:1902584: positive regulation of response to water deprivation	1.43E-03
39	GO:0010188: response to microbial phytotoxin	1.43E-03
40	GO:0006878: cellular copper ion homeostasis	1.43E-03
41	GO:0009620: response to fungus	1.66E-03
42	GO:0045927: positive regulation of growth	1.81E-03
43	GO:0071423: malate transmembrane transport	1.81E-03
44	GO:0046283: anthocyanin-containing compound metabolic process	1.81E-03
45	GO:0016192: vesicle-mediated transport	1.86E-03
46	GO:0009851: auxin biosynthetic process	1.91E-03
47	GO:0006555: methionine metabolic process	2.24E-03
48	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.24E-03
49	GO:0035435: phosphate ion transmembrane transport	2.24E-03
50	GO:0009972: cytidine deamination	2.24E-03
51	GO:0045454: cell redox homeostasis	2.26E-03
52	GO:0009058: biosynthetic process	2.64E-03
53	GO:0019509: L-methionine salvage from methylthioadenosine	2.69E-03
54	GO:0034389: lipid particle organization	2.69E-03
55	GO:0009082: branched-chain amino acid biosynthetic process	2.69E-03
56	GO:0009099: valine biosynthetic process	2.69E-03
57	GO:0009554: megasporogenesis	2.69E-03
58	GO:0080113: regulation of seed growth	2.69E-03
59	GO:0055114: oxidation-reduction process	2.84E-03
60	GO:0009615: response to virus	2.93E-03
61	GO:0009751: response to salicylic acid	3.05E-03
62	GO:0080186: developmental vegetative growth	3.16E-03
63	GO:0071669: plant-type cell wall organization or biogenesis	3.16E-03
64	GO:0008272: sulfate transport	3.16E-03
65	GO:0050829: defense response to Gram-negative bacterium	3.16E-03
66	GO:1900057: positive regulation of leaf senescence	3.16E-03
67	GO:1902074: response to salt	3.16E-03
68	GO:0006491: N-glycan processing	3.67E-03
69	GO:0043068: positive regulation of programmed cell death	3.67E-03
70	GO:0010150: leaf senescence	3.72E-03
71	GO:0009699: phenylpropanoid biosynthetic process	4.20E-03
72	GO:0006002: fructose 6-phosphate metabolic process	4.20E-03
73	GO:0007186: G-protein coupled receptor signaling pathway	4.20E-03
74	GO:0019430: removal of superoxide radicals	4.20E-03
75	GO:0010497: plasmodesmata-mediated intercellular transport	4.20E-03
76	GO:0009097: isoleucine biosynthetic process	4.20E-03
77	GO:0010043: response to zinc ion	4.42E-03
78	GO:0046685: response to arsenic-containing substance	4.75E-03
79	GO:0009821: alkaloid biosynthetic process	4.75E-03
80	GO:0009098: leucine biosynthetic process	5.32E-03
81	GO:2000280: regulation of root development	5.32E-03
82	GO:0006032: chitin catabolic process	5.93E-03
83	GO:0009688: abscisic acid biosynthetic process	5.93E-03
84	GO:0043069: negative regulation of programmed cell death	5.93E-03
85	GO:0052544: defense response by callose deposition in cell wall	6.55E-03
86	GO:0000272: polysaccharide catabolic process	6.55E-03
87	GO:0009651: response to salt stress	6.75E-03
88	GO:0009636: response to toxic substance	7.00E-03
89	GO:0071365: cellular response to auxin stimulus	7.20E-03
90	GO:0006790: sulfur compound metabolic process	7.20E-03
91	GO:0016925: protein sumoylation	7.20E-03
92	GO:0031347: regulation of defense response	7.55E-03
93	GO:0009733: response to auxin	7.71E-03
94	GO:0055046: microgametogenesis	7.87E-03
95	GO:0007033: vacuole organization	9.27E-03
96	GO:0010053: root epidermal cell differentiation	9.27E-03
97	GO:0007030: Golgi organization	9.27E-03
98	GO:0090351: seedling development	9.27E-03
99	GO:0046854: phosphatidylinositol phosphorylation	9.27E-03
100	GO:0006417: regulation of translation	9.31E-03
101	GO:0034976: response to endoplasmic reticulum stress	1.00E-02
102	GO:0006886: intracellular protein transport	1.12E-02
103	GO:0019915: lipid storage	1.23E-02
104	GO:0016998: cell wall macromolecule catabolic process	1.23E-02
105	GO:0015992: proton transport	1.23E-02
106	GO:0019748: secondary metabolic process	1.32E-02
107	GO:0030245: cellulose catabolic process	1.32E-02
108	GO:0006730: one-carbon metabolic process	1.32E-02
109	GO:0010227: floral organ abscission	1.40E-02
110	GO:0009693: ethylene biosynthetic process	1.40E-02
111	GO:0009561: megagametogenesis	1.48E-02
112	GO:0009306: protein secretion	1.48E-02
113	GO:0050832: defense response to fungus	1.49E-02
114	GO:0042147: retrograde transport, endosome to Golgi	1.57E-02
115	GO:0045489: pectin biosynthetic process	1.75E-02
116	GO:0006662: glycerol ether metabolic process	1.75E-02
117	GO:0048544: recognition of pollen	1.84E-02
118	GO:0006814: sodium ion transport	1.84E-02
119	GO:0006891: intra-Golgi vesicle-mediated transport	2.03E-02
120	GO:0006635: fatty acid beta-oxidation	2.03E-02
121	GO:0045490: pectin catabolic process	2.08E-02
122	GO:0009630: gravitropism	2.13E-02
123	GO:0042742: defense response to bacterium	2.15E-02
124	GO:0006979: response to oxidative stress	2.18E-02
125	GO:1901657: glycosyl compound metabolic process	2.23E-02
126	GO:0071281: cellular response to iron ion	2.23E-02
127	GO:0009567: double fertilization forming a zygote and endosperm	2.33E-02
128	GO:0019760: glucosinolate metabolic process	2.33E-02
129	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.33E-02
130	GO:0010252: auxin homeostasis	2.33E-02
131	GO:0006464: cellular protein modification process	2.33E-02
132	GO:0010468: regulation of gene expression	2.48E-02
133	GO:0010029: regulation of seed germination	2.75E-02
134	GO:0009627: systemic acquired resistance	2.86E-02
135	GO:0006906: vesicle fusion	2.86E-02
136	GO:0006974: cellular response to DNA damage stimulus	2.86E-02
137	GO:0015031: protein transport	3.07E-02
138	GO:0016049: cell growth	3.08E-02
139	GO:0009817: defense response to fungus, incompatible interaction	3.19E-02
140	GO:0048767: root hair elongation	3.31E-02
141	GO:0006499: N-terminal protein myristoylation	3.42E-02
142	GO:0048527: lateral root development	3.54E-02
143	GO:0009723: response to ethylene	3.72E-02
144	GO:0045087: innate immune response	3.78E-02
145	GO:0034599: cellular response to oxidative stress	3.90E-02
146	GO:0006839: mitochondrial transport	4.15E-02
147	GO:0006887: exocytosis	4.27E-02
148	GO:0042542: response to hydrogen peroxide	4.40E-02
149	GO:0051707: response to other organism	4.52E-02
150	GO:0000209: protein polyubiquitination	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0047844: deoxycytidine deaminase activity	0.00E+00
4	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.45E-08
5	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	7.36E-05
6	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	7.36E-05
7	GO:0016229: steroid dehydrogenase activity	2.06E-04
8	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.06E-04
9	GO:2001227: quercitrin binding	2.06E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.06E-04
11	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.06E-04
12	GO:0070401: NADP+ binding	2.06E-04
13	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.06E-04
14	GO:0032266: phosphatidylinositol-3-phosphate binding	2.06E-04
15	GO:0004348: glucosylceramidase activity	2.06E-04
16	GO:2001147: camalexin binding	2.06E-04
17	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.06E-04
18	GO:0004649: poly(ADP-ribose) glycohydrolase activity	2.06E-04
19	GO:0010297: heteropolysaccharide binding	4.62E-04
20	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	4.62E-04
21	GO:0004617: phosphoglycerate dehydrogenase activity	4.62E-04
22	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.62E-04
23	GO:0015117: thiosulfate transmembrane transporter activity	4.62E-04
24	GO:1901677: phosphate transmembrane transporter activity	4.62E-04
25	GO:0052739: phosphatidylserine 1-acylhydrolase activity	4.62E-04
26	GO:0005217: intracellular ligand-gated ion channel activity	6.92E-04
27	GO:0004970: ionotropic glutamate receptor activity	6.92E-04
28	GO:0004478: methionine adenosyltransferase activity	7.52E-04
29	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.52E-04
30	GO:0005310: dicarboxylic acid transmembrane transporter activity	7.52E-04
31	GO:0015141: succinate transmembrane transporter activity	7.52E-04
32	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.52E-04
33	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.52E-04
34	GO:0004364: glutathione transferase activity	7.86E-04
35	GO:0051287: NAD binding	1.04E-03
36	GO:0017077: oxidative phosphorylation uncoupler activity	1.07E-03
37	GO:0052655: L-valine transaminase activity	1.07E-03
38	GO:0019201: nucleotide kinase activity	1.07E-03
39	GO:0015131: oxaloacetate transmembrane transporter activity	1.07E-03
40	GO:0005432: calcium:sodium antiporter activity	1.07E-03
41	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.07E-03
42	GO:0052656: L-isoleucine transaminase activity	1.07E-03
43	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.07E-03
44	GO:0052654: L-leucine transaminase activity	1.07E-03
45	GO:0004834: tryptophan synthase activity	1.43E-03
46	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.43E-03
47	GO:0004084: branched-chain-amino-acid transaminase activity	1.43E-03
48	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.43E-03
49	GO:0004031: aldehyde oxidase activity	1.43E-03
50	GO:0050302: indole-3-acetaldehyde oxidase activity	1.43E-03
51	GO:0004930: G-protein coupled receptor activity	1.43E-03
52	GO:0010279: indole-3-acetic acid amido synthetase activity	1.43E-03
53	GO:0004791: thioredoxin-disulfide reductase activity	1.78E-03
54	GO:0008374: O-acyltransferase activity	1.81E-03
55	GO:0031386: protein tag	1.81E-03
56	GO:0035252: UDP-xylosyltransferase activity	2.24E-03
57	GO:0051920: peroxiredoxin activity	2.69E-03
58	GO:0004126: cytidine deaminase activity	2.69E-03
59	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.69E-03
60	GO:0004017: adenylate kinase activity	2.69E-03
61	GO:0004602: glutathione peroxidase activity	2.69E-03
62	GO:0003872: 6-phosphofructokinase activity	3.16E-03
63	GO:0015140: malate transmembrane transporter activity	3.16E-03
64	GO:0008320: protein transmembrane transporter activity	3.16E-03
65	GO:0043295: glutathione binding	3.16E-03
66	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.67E-03
67	GO:0016209: antioxidant activity	3.67E-03
68	GO:0004033: aldo-keto reductase (NADP) activity	3.67E-03
69	GO:0015491: cation:cation antiporter activity	3.67E-03
70	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.20E-03
71	GO:0016844: strictosidine synthase activity	5.32E-03
72	GO:0004568: chitinase activity	5.93E-03
73	GO:0004601: peroxidase activity	6.48E-03
74	GO:0015116: sulfate transmembrane transporter activity	7.20E-03
75	GO:0050660: flavin adenine dinucleotide binding	7.80E-03
76	GO:0008061: chitin binding	9.27E-03
77	GO:0043130: ubiquitin binding	1.08E-02
78	GO:0015035: protein disulfide oxidoreductase activity	1.23E-02
79	GO:0008810: cellulase activity	1.40E-02
80	GO:0003756: protein disulfide isomerase activity	1.48E-02
81	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.48E-02
82	GO:0047134: protein-disulfide reductase activity	1.57E-02
83	GO:0030170: pyridoxal phosphate binding	1.67E-02
84	GO:0005199: structural constituent of cell wall	1.75E-02
85	GO:0010181: FMN binding	1.84E-02
86	GO:0015297: antiporter activity	1.98E-02
87	GO:0004518: nuclease activity	2.13E-02
88	GO:0044212: transcription regulatory region DNA binding	2.15E-02
89	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.23E-02
90	GO:0008483: transaminase activity	2.43E-02
91	GO:0003824: catalytic activity	2.47E-02
92	GO:0016597: amino acid binding	2.54E-02
93	GO:0051213: dioxygenase activity	2.64E-02
94	GO:0008270: zinc ion binding	2.93E-02
95	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.97E-02
96	GO:0102483: scopolin beta-glucosidase activity	2.97E-02
97	GO:0000287: magnesium ion binding	3.16E-02
98	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.19E-02
99	GO:0043531: ADP binding	3.53E-02
100	GO:0030145: manganese ion binding	3.54E-02
101	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.54E-02
102	GO:0016740: transferase activity	3.68E-02
103	GO:0003746: translation elongation factor activity	3.78E-02
104	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.78E-02
105	GO:0003993: acid phosphatase activity	3.90E-02
106	GO:0008422: beta-glucosidase activity	4.02E-02
107	GO:0000149: SNARE binding	4.02E-02
108	GO:0050661: NADP binding	4.15E-02
109	GO:0042393: histone binding	4.15E-02
110	GO:0061630: ubiquitin protein ligase activity	4.18E-02
111	GO:0005507: copper ion binding	4.45E-02
112	GO:0005484: SNAP receptor activity	4.52E-02
113	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.75E-02
114	GO:0051537: 2 iron, 2 sulfur cluster binding	4.78E-02
115	GO:0005198: structural molecule activity	4.91E-02
116	GO:0042803: protein homodimerization activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0045252: oxoglutarate dehydrogenase complex	2.06E-04
2	GO:0031901: early endosome membrane	2.61E-04
3	GO:0000814: ESCRT II complex	4.62E-04
4	GO:0030130: clathrin coat of trans-Golgi network vesicle	7.52E-04
5	GO:0030132: clathrin coat of coated pit	7.52E-04
6	GO:0009530: primary cell wall	7.52E-04
7	GO:0005945: 6-phosphofructokinase complex	1.81E-03
8	GO:0030173: integral component of Golgi membrane	2.69E-03
9	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.16E-03
10	GO:0005829: cytosol	3.74E-03
11	GO:0005811: lipid particle	4.20E-03
12	GO:0031090: organelle membrane	4.75E-03
13	GO:0005886: plasma membrane	6.34E-03
14	GO:0005773: vacuole	6.91E-03
15	GO:0005769: early endosome	1.00E-02
16	GO:0005783: endoplasmic reticulum	1.30E-02
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.48E-02
18	GO:0005770: late endosome	1.75E-02
19	GO:0005768: endosome	1.84E-02
20	GO:0019898: extrinsic component of membrane	1.94E-02
21	GO:0009504: cell plate	1.94E-02
22	GO:0016592: mediator complex	2.13E-02
23	GO:0071944: cell periphery	2.23E-02
24	GO:0032580: Golgi cisterna membrane	2.33E-02
25	GO:0009506: plasmodesma	2.50E-02
26	GO:0005788: endoplasmic reticulum lumen	2.75E-02
27	GO:0009505: plant-type cell wall	3.00E-02
28	GO:0009707: chloroplast outer membrane	3.19E-02
29	GO:0005737: cytoplasm	3.58E-02
30	GO:0031201: SNARE complex	4.27E-02