gene detail

Gene description

TAIR ID: AT5G46830

Short description: NACL-inducible gene 1

Pathogen responsiveness: -0.49

General responsiveness: -1.41

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

hyperosmotic salinity response, regulation of transcription, DNA-templated, transcription, response to salt stress

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein dimerization activity

Protein domain

Pfam	PF14215, bHLH-MYC and R2R3-MYB transcription factors N-terminal
Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 16 (Top20%)

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-3.47	1.71E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-2.24	3.26E-02
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-1.80	1.28E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.16	2.66E-06
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.74	2.70E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.79	4.96E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.89	3.00E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.63	9.23E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-2.57	3.00E-04
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.53	1.47E-07