gene detail

Gene description

TAIR ID: AT5G46180

Short description: ornithine-delta-aminotransferase

Pathogen responsiveness: -0.47

General responsiveness: -1.23

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G080828

Wheat: No orthologous gene

GO biological process

arginine catabolic process to glutamate, proline biosynthetic process, response to salt stress, ornithine catabolic process, hyperosmotic salinity response, plant-type hypersensitive response, defense response to bacterium, incompatible interaction, mitochondrion localization

GO cellular component

mitochondrial matrix, cytoplasm, mitochondrion

GO molecular function

pyridoxal phosphate binding, ornithine-oxo-acid transaminase activity, identical protein binding

Protein domain

Pfam	PF00202, Aminotransferase class-III

Metabolic pathway

ARG-PRO-PWY: arginine degradation VI (arginase 2 pathway)
ARGININE-SYN4-PWY: arginine biosynthesis IV
PWY-3341: proline biosynthesis III
PWY-6922: L-N^δ-acetylornithine biosynthesis
ARGASEDEG-PWY: arginine degradation I (arginase pathway)
CITRULBIO-PWY: citrulline biosynthesis
PWY-5004: superpathway of citrulline metabolism

KEGG pathway

PATH:ath00330: Arginine and proline metabolism

Transcriptional regulation

Regulator:
AT5G13790, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.83	8.16E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.27	9.24E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.23	1.50E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.02	1.07E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.57	1.24E-07
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.10	2.03E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.29	9.25E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.12	2.97E-13
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.05	5.93E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.95	1.45E-09
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.77	3.98E-08
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.22	1.70E-11
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.35	4.70E-06