gene detail

Gene description

TAIR ID: AT5G44440

Short description: FAD-binding Berberine family protein

Pathogen responsiveness: -2.18

General responsiveness: -2.75

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, response to salt stress

GO cellular component

chloroplast, extracellular region

GO molecular function

oxidoreductase activity, acting on CH-OH group of donors, electron carrier activity, flavin adenine dinucleotide binding

Protein domain

Pfam	PF08031, Berberine and berberine like
Pfam	PF01565, FAD binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	1.76	3.06E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.71	2.67E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.88	2.35E-04