Gene: AT5G42190
Gene description
TAIR ID: AT5G42190
Short description: E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Pathogen responsiveness: -1.91
General responsiveness: -3.46
GO biological process
auxin-activated signaling pathway, protein ubiquitination, ubiquitin-dependent protein catabolic process, ethylene-activated signaling pathway, viral process, chromosome segregation, embryo development ending in seed dormancy
GO cellular component
cytoplasm, nucleus
GO molecular function
protein binding, ubiquitin-protein transferase activity
Protein domain
| Pfam | PF03931, Skp1 family, tetramerisation domain |
| Pfam | PF01466, Skp1 family, dimerisation domain |
| SMART | SM00512, Skp1 |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
PATH:ath04141: Protein processing in endoplasmic reticulum
PATH:ath04120: Ubiquitin mediated proteolysis
Protein-protein interaction network
The number of partners (degree) is: 140 (Top5%)
click to view PPI networkCoexpression network
Differentially expressed condition 
1 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 1.56 | 3.37E-09 |
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