gene detail

Gene description

TAIR ID: AT5G40380

Short description: cysteine-rich RLK (RECEPTOR-like protein kinase) 42

Pathogen responsiveness: -0.10

General responsiveness: 1.07

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, phosphorylation

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

protein kinase activity, protein serine/threonine kinase activity, ATP binding, kinase activity

Protein domain

Pfam	PF00069, Protein kinase domain
Pfam	PF01657, Salt stress response/antifungal
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

19 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-1.79	6.70E-08
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-2.47	2.96E-09
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.78	1.86E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.71	1.14E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.64	2.60E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.64	1.04E-07
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	-1.53	3.10E-02
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-1.79	1.26E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.73	2.20E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.28	1.63E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.27	5.73E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.67	1.41E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.51	6.60E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.52	2.18E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.55	4.67E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.65	3.91E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.73	3.26E-10
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-2.82	5.57E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-2.59	1.13E-03