co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G40380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0071555: cell wall organization	2.06E-05
4	GO:0071370: cellular response to gibberellin stimulus	4.88E-05
5	GO:0033481: galacturonate biosynthetic process	4.88E-05
6	GO:0000066: mitochondrial ornithine transport	4.88E-05
7	GO:0048587: regulation of short-day photoperiodism, flowering	1.20E-04
8	GO:0007154: cell communication	1.20E-04
9	GO:1900111: positive regulation of histone H3-K9 dimethylation	1.20E-04
10	GO:0032922: circadian regulation of gene expression	2.06E-04
11	GO:0046417: chorismate metabolic process	2.06E-04
12	GO:0045489: pectin biosynthetic process	2.50E-04
13	GO:0032877: positive regulation of DNA endoreduplication	3.01E-04
14	GO:0009635: response to herbicide	6.29E-04
15	GO:0050665: hydrogen peroxide biosynthetic process	6.29E-04
16	GO:0010304: PSII associated light-harvesting complex II catabolic process	6.29E-04
17	GO:0045926: negative regulation of growth	7.50E-04
18	GO:0017148: negative regulation of translation	7.50E-04
19	GO:0009854: oxidative photosynthetic carbon pathway	7.50E-04
20	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.50E-04
21	GO:0050829: defense response to Gram-negative bacterium	8.75E-04
22	GO:0098869: cellular oxidant detoxification	8.75E-04
23	GO:0052543: callose deposition in cell wall	1.01E-03
24	GO:0006754: ATP biosynthetic process	1.28E-03
25	GO:0010192: mucilage biosynthetic process	1.59E-03
26	GO:0009073: aromatic amino acid family biosynthetic process	1.75E-03
27	GO:0009742: brassinosteroid mediated signaling pathway	1.83E-03
28	GO:0015706: nitrate transport	1.91E-03
29	GO:0009725: response to hormone	2.08E-03
30	GO:0009225: nucleotide-sugar metabolic process	2.44E-03
31	GO:0042343: indole glucosinolate metabolic process	2.44E-03
32	GO:0010167: response to nitrate	2.44E-03
33	GO:0005985: sucrose metabolic process	2.44E-03
34	GO:0009833: plant-type primary cell wall biogenesis	2.62E-03
35	GO:0006833: water transport	2.62E-03
36	GO:0005992: trehalose biosynthetic process	2.81E-03
37	GO:0098542: defense response to other organism	3.20E-03
38	GO:0019722: calcium-mediated signaling	3.82E-03
39	GO:0048653: anther development	4.26E-03
40	GO:0000271: polysaccharide biosynthetic process	4.26E-03
41	GO:0080022: primary root development	4.26E-03
42	GO:0034220: ion transmembrane transport	4.26E-03
43	GO:0009741: response to brassinosteroid	4.48E-03
44	GO:0007059: chromosome segregation	4.71E-03
45	GO:0007049: cell cycle	5.08E-03
46	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.18E-03
47	GO:0007264: small GTPase mediated signal transduction	5.42E-03
48	GO:0010583: response to cyclopentenone	5.42E-03
49	GO:0080167: response to karrikin	5.63E-03
50	GO:0007267: cell-cell signaling	6.16E-03
51	GO:0051607: defense response to virus	6.42E-03
52	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.94E-03
53	GO:0042128: nitrate assimilation	7.20E-03
54	GO:0048481: plant ovule development	8.03E-03
55	GO:0030244: cellulose biosynthetic process	8.03E-03
56	GO:0009813: flavonoid biosynthetic process	8.31E-03
57	GO:0009832: plant-type cell wall biogenesis	8.31E-03
58	GO:0016051: carbohydrate biosynthetic process	9.47E-03
59	GO:0005975: carbohydrate metabolic process	1.00E-02
60	GO:0006839: mitochondrial transport	1.04E-02
61	GO:0009744: response to sucrose	1.13E-02
62	GO:0042546: cell wall biogenesis	1.16E-02
63	GO:0006857: oligopeptide transport	1.47E-02
64	GO:0048316: seed development	1.61E-02
65	GO:0051301: cell division	1.61E-02
66	GO:0051726: regulation of cell cycle	1.87E-02
67	GO:0040008: regulation of growth	2.56E-02
68	GO:0010228: vegetative to reproductive phase transition of meristem	2.73E-02
69	GO:0009414: response to water deprivation	2.93E-02
70	GO:0042742: defense response to bacterium	3.00E-02
71	GO:0009617: response to bacterium	3.00E-02
72	GO:0006810: transport	4.39E-02
73	GO:0046777: protein autophosphorylation	4.41E-02
74	GO:0044550: secondary metabolite biosynthetic process	4.47E-02
75	GO:0045454: cell redox homeostasis	4.78E-02
76	GO:0045892: negative regulation of transcription, DNA-templated	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0010313: phytochrome binding	4.88E-05
2	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.25E-05
3	GO:0000064: L-ornithine transmembrane transporter activity	1.20E-04
4	GO:0048531: beta-1,3-galactosyltransferase activity	1.20E-04
5	GO:0004106: chorismate mutase activity	1.20E-04
6	GO:0001872: (1->3)-beta-D-glucan binding	3.01E-04
7	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	3.01E-04
8	GO:0048027: mRNA 5'-UTR binding	3.01E-04
9	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	3.01E-04
10	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	3.01E-04
11	GO:0045430: chalcone isomerase activity	4.04E-04
12	GO:0050378: UDP-glucuronate 4-epimerase activity	4.04E-04
13	GO:0008891: glycolate oxidase activity	4.04E-04
14	GO:0030247: polysaccharide binding	5.26E-04
15	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.79E-04
16	GO:0016688: L-ascorbate peroxidase activity	6.29E-04
17	GO:0035064: methylated histone binding	1.01E-03
18	GO:0004564: beta-fructofuranosidase activity	1.01E-03
19	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.28E-03
20	GO:0004575: sucrose alpha-glucosidase activity	1.43E-03
21	GO:0015112: nitrate transmembrane transporter activity	1.43E-03
22	GO:0004805: trehalose-phosphatase activity	1.59E-03
23	GO:0004860: protein kinase inhibitor activity	1.75E-03
24	GO:0016758: transferase activity, transferring hexosyl groups	2.10E-03
25	GO:0004176: ATP-dependent peptidase activity	3.20E-03
26	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.41E-03
27	GO:0016760: cellulose synthase (UDP-forming) activity	3.61E-03
28	GO:0010181: FMN binding	4.71E-03
29	GO:0019901: protein kinase binding	4.94E-03
30	GO:0004872: receptor activity	4.94E-03
31	GO:0004518: nuclease activity	5.42E-03
32	GO:0016759: cellulose synthase activity	5.91E-03
33	GO:0008237: metallopeptidase activity	6.16E-03
34	GO:0015250: water channel activity	6.67E-03
35	GO:0016757: transferase activity, transferring glycosyl groups	7.00E-03
36	GO:0004222: metalloendopeptidase activity	8.60E-03
37	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	8.60E-03
38	GO:0015293: symporter activity	1.23E-02
39	GO:0016887: ATPase activity	1.29E-02
40	GO:0004650: polygalacturonase activity	1.68E-02
41	GO:0015035: protein disulfide oxidoreductase activity	1.83E-02
42	GO:0016829: lyase activity	2.23E-02
43	GO:0008194: UDP-glycosyltransferase activity	2.87E-02
44	GO:0042802: identical protein binding	3.14E-02
45	GO:0005215: transporter activity	3.32E-02
46	GO:0016788: hydrolase activity, acting on ester bonds	3.66E-02
47	GO:0052689: carboxylic ester hydrolase activity	4.52E-02
48	GO:0004871: signal transducer activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	3.26E-06
2	GO:0046658: anchored component of plasma membrane	3.64E-05
3	GO:0031225: anchored component of membrane	1.09E-04
4	GO:0031519: PcG protein complex	2.06E-04
5	GO:0005775: vacuolar lumen	3.01E-04
6	GO:0016021: integral component of membrane	3.33E-04
7	GO:0031902: late endosome membrane	8.59E-04
8	GO:0005677: chromatin silencing complex	1.14E-03
9	GO:0009506: plasmodesma	1.72E-03
10	GO:0005765: lysosomal membrane	1.75E-03
11	GO:0032580: Golgi cisterna membrane	5.91E-03
12	GO:0009536: plastid	7.62E-03
13	GO:0005743: mitochondrial inner membrane	7.73E-03
14	GO:0000139: Golgi membrane	8.64E-03
15	GO:0000325: plant-type vacuole	8.88E-03
16	GO:0005886: plasma membrane	9.43E-03
17	GO:0005819: spindle	1.01E-02
18	GO:0005794: Golgi apparatus	1.02E-02
19	GO:0005576: extracellular region	1.38E-02