gene detail

Gene description

TAIR ID: AT5G39790

Short description: 5'-AMP-activated protein kinase-related

Pathogen responsiveness: -1.08

General responsiveness: -0.50

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

starch biosynthetic process, regulation of starch biosynthetic process, protein binding

GO cellular component

chloroplast stroma, chloroplast starch grain, chloroplast

GO molecular function

protein binding, starch binding

Protein domain

Pfam	PF16561, Glycogen recognition site of AMP-activated protein kinase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.55	4.37E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.88	3.11E-05
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	-1.55	5.45E-05
GSE67100	pDMR6:GFP GFP-negative, control 7 d	pDMR6:GFP GFP-positive, Hpa Noks1 7 d	-4.37	4.58E-02