GO Enrichment Analysis of Co-expressed Genes with
AT5G39790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0009443: pyridoxal 5'-phosphate salvage | 9.64E-06 |
| 6 | GO:0009658: chloroplast organization | 3.10E-05 |
| 7 | GO:0009765: photosynthesis, light harvesting | 9.96E-05 |
| 8 | GO:0016123: xanthophyll biosynthetic process | 1.30E-04 |
| 9 | GO:0016120: carotene biosynthetic process | 1.30E-04 |
| 10 | GO:0009395: phospholipid catabolic process | 2.34E-04 |
| 11 | GO:0042255: ribosome assembly | 2.72E-04 |
| 12 | GO:0006353: DNA-templated transcription, termination | 2.72E-04 |
| 13 | GO:0032544: plastid translation | 3.11E-04 |
| 14 | GO:0017004: cytochrome complex assembly | 3.11E-04 |
| 15 | GO:0048589: developmental growth | 3.51E-04 |
| 16 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.78E-04 |
| 17 | GO:0042254: ribosome biogenesis | 6.55E-04 |
| 18 | GO:0000027: ribosomal large subunit assembly | 7.58E-04 |
| 19 | GO:0007010: cytoskeleton organization | 7.58E-04 |
| 20 | GO:0016117: carotenoid biosynthetic process | 1.07E-03 |
| 21 | GO:0008033: tRNA processing | 1.12E-03 |
| 22 | GO:0032502: developmental process | 1.41E-03 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 1.92E-03 |
| 24 | GO:0009817: defense response to fungus, incompatible interaction | 2.05E-03 |
| 25 | GO:0048767: root hair elongation | 2.12E-03 |
| 26 | GO:0006412: translation | 3.55E-03 |
| 27 | GO:0042742: defense response to bacterium | 3.96E-03 |
| 28 | GO:0009790: embryo development | 5.75E-03 |
| 29 | GO:0008380: RNA splicing | 7.30E-03 |
| 30 | GO:0015979: photosynthesis | 1.12E-02 |
| 31 | GO:0045454: cell redox homeostasis | 1.15E-02 |
| 32 | GO:0006508: proteolysis | 1.22E-02 |
| 33 | GO:0009735: response to cytokinin | 1.89E-02 |
| 34 | GO:0035556: intracellular signal transduction | 2.09E-02 |
| 35 | GO:0006457: protein folding | 2.42E-02 |
| 36 | GO:0055114: oxidation-reduction process | 3.34E-02 |
| 37 | GO:0015031: protein transport | 3.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 8.93E-06 |
| 4 | GO:0070402: NADPH binding | 4.69E-05 |
| 5 | GO:0043023: ribosomal large subunit binding | 7.16E-05 |
| 6 | GO:0016851: magnesium chelatase activity | 7.16E-05 |
| 7 | GO:0051920: peroxiredoxin activity | 1.98E-04 |
| 8 | GO:0016209: antioxidant activity | 2.72E-04 |
| 9 | GO:0004033: aldo-keto reductase (NADP) activity | 2.72E-04 |
| 10 | GO:0003727: single-stranded RNA binding | 1.01E-03 |
| 11 | GO:0005200: structural constituent of cytoskeleton | 1.59E-03 |
| 12 | GO:0008237: metallopeptidase activity | 1.59E-03 |
| 13 | GO:0008236: serine-type peptidase activity | 1.98E-03 |
| 14 | GO:0004222: metalloendopeptidase activity | 2.19E-03 |
| 15 | GO:0003993: acid phosphatase activity | 2.48E-03 |
| 16 | GO:0003690: double-stranded DNA binding | 3.57E-03 |
| 17 | GO:0008026: ATP-dependent helicase activity | 4.61E-03 |
| 18 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 5.27E-03 |
| 19 | GO:0003723: RNA binding | 5.92E-03 |
| 20 | GO:0003735: structural constituent of ribosome | 7.86E-03 |
| 21 | GO:0004601: peroxidase activity | 8.74E-03 |
| 22 | GO:0016788: hydrolase activity, acting on ester bonds | 8.86E-03 |
| 23 | GO:0016887: ATPase activity | 1.83E-02 |
| 24 | GO:0005507: copper ion binding | 2.59E-02 |
| 25 | GO:0003729: mRNA binding | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.81E-12 |
| 2 | GO:0009570: chloroplast stroma | 2.32E-08 |
| 3 | GO:0010007: magnesium chelatase complex | 4.69E-05 |
| 4 | GO:0009941: chloroplast envelope | 5.69E-05 |
| 5 | GO:0009579: thylakoid | 2.28E-04 |
| 6 | GO:0031969: chloroplast membrane | 7.90E-04 |
| 7 | GO:0042651: thylakoid membrane | 8.07E-04 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.23E-03 |
| 9 | GO:0031977: thylakoid lumen | 2.70E-03 |
| 10 | GO:0005856: cytoskeleton | 3.08E-03 |
| 11 | GO:0005840: ribosome | 4.15E-03 |
| 12 | GO:0009536: plastid | 4.85E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 5.17E-03 |
| 14 | GO:0022625: cytosolic large ribosomal subunit | 1.05E-02 |
| 15 | GO:0022626: cytosolic ribosome | 1.95E-02 |
| 16 | GO:0009505: plant-type cell wall | 3.91E-02 |
| 17 | GO:0005730: nucleolus | 4.84E-02 |