Gene: AT5G38410
     


Gene description


TAIR ID: AT5G38410

Short description: Ribulose bisphosphate carboxylase (small chain) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G098520   GRMZM2G113033  

Wheat: No orthologous gene

GO biological process


photosynthesis, response to red light, oxidation-reduction process, chloroplast ribulose bisphosphate carboxylase complex biogenesis, carbon fixation, response to blue light, photorespiration, response to far red light, reductive pentose-phosphate cycle


GO cellular component


chloroplast envelope, thylakoid, chloroplast stroma, cytosolic ribosome, chloroplast ribulose bisphosphate carboxylase complex, membrane, chloroplast, apoplast, cell wall


GO molecular function


monooxygenase activity, ribulose-bisphosphate carboxylase activity


Protein domain


PfamPF12338, Ribulose-1,5-bisphosphate carboxylase small subunit
PfamPF00101, Ribulose bisphosphate carboxylase, small chain
SMARTSM00961, RuBisCO_small

Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT1G24260, AT5G49450, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.742.66E-14
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.053.48E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.166.57E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.809.72E-08
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.702.36E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.744.76E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.773.61E-07






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