Gene description
Orthologous
GO biological process
photosynthesis, response to red light, oxidation-reduction process, chloroplast ribulose bisphosphate carboxylase complex biogenesis, carbon fixation, response to blue light, photorespiration, response to far red light, reductive pentose-phosphate cycle
GO cellular component
chloroplast envelope, thylakoid, chloroplast stroma, cytosolic ribosome, chloroplast ribulose bisphosphate carboxylase complex, membrane, chloroplast, apoplast, cell wall
GO molecular function
monooxygenase activity, ribulose-bisphosphate carboxylase activity
Protein domain
Pfam | PF12338, Ribulose-1,5-bisphosphate carboxylase small subunit |
Pfam | PF00101, Ribulose bisphosphate carboxylase, small chain |
SMART | SM00961, RuBisCO_small |
Metabolic pathway
KEGG pathway
Transcriptional regulation
Regulator:
AT5G13790, AT5G11260, AT1G24260, AT5G49450, AT5G61850
Target:
none
Coexpression network
Differentially expressed condition
7 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -2.74 | 2.66E-14 |
GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | -2.05 | 3.48E-09 |
GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -2.16 | 6.57E-10 |
GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | -1.80 | 9.72E-08 |
GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -1.70 | 2.36E-06 |
GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | -1.74 | 4.76E-07 |
GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | -1.77 | 3.61E-07 |
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