gene detail

Gene description

TAIR ID: AT5G37055

Short description: HIT-type Zinc finger family protein

Pathogen responsiveness: -2.19

General responsiveness: -1.63

Orthologous

Rice:

OS03G0367800

Maize:

GRMZM2G089876

Wheat: No orthologous gene

GO biological process

flower development, histone exchange, cell differentiation, regulation of histone deacetylation, defense response to bacterium, regulation of flower development, regulation of developmental growth

GO cellular component

nucleus, nuclear speck, Swr1 complex

GO molecular function

protein binding, identical protein binding, histone deacetylase binding, nucleosome binding, hydrolase activity, metal ion binding

Protein domain

Pfam	PF04438, HIT zinc finger

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.51	3.69E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.67	4.10E-08