Gene: AT5G35840
     


Gene description


TAIR ID: AT5G35840

Short description: phytochrome C

Pathogen responsiveness: -1.67

General responsiveness: -2.92

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G057935  

Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription, red, far-red light phototransduction, protein-tetrapyrrole linkage, protein-chromophore linkage, detection of visible light


GO cellular component


unkown


GO molecular function


protein histidine kinase activity, protein binding, protein homodimerization activity, photoreceptor activity


Protein domain


PfamPF00989, PAS fold
PfamPF08446, PAS fold
PfamPF00360, Phytochrome region
PfamPF01590, GAF domain
PfamPF02518, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SMARTSM00387, HATPase_c
SMARTSM00091, PAS
SMARTSM00065, GAF
SMARTSM00086, PAC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990, AT3G59060

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.512.47E-02






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