Gene: AT5G35210
     

Gene description


TAIR ID: AT5G35210

Short description: metalloendopeptidases;zinc ion binding;DNA binding

Pathogen responsiveness: -1.24

General responsiveness: -1.16

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G314661  

Wheat:

TAAFFX.36682.1.A1_AT  


GO biological process


positive regulation of transcription, DNA-templated, regulation of transcription, chloroplast-nucleus signaling pathway


GO cellular component


chloroplast outer membrane, chloroplast envelope, nucleus


GO molecular function


unkown


Protein domain


PfamPF00628, PHD-finger
PfamPF02791, DDT domain
PfamPF15612, WSTF, HB1, Itc1p, MBD9 motif 1
SMARTSM00571, DDT
SMARTSM00249, PHD

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.751.04E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.682.47E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.752.87E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.518.03E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.605.42E-13






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.