GO Enrichment Analysis of Co-expressed Genes with
AT5G35210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 2 | GO:0019284: L-methionine salvage from S-adenosylmethionine | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 8 | GO:0071482: cellular response to light stimulus | 4.17E-07 |
| 9 | GO:0006000: fructose metabolic process | 1.27E-06 |
| 10 | GO:0009853: photorespiration | 3.50E-06 |
| 11 | GO:0010196: nonphotochemical quenching | 2.90E-05 |
| 12 | GO:0006002: fructose 6-phosphate metabolic process | 4.85E-05 |
| 13 | GO:0009657: plastid organization | 4.85E-05 |
| 14 | GO:0043609: regulation of carbon utilization | 7.75E-05 |
| 15 | GO:0006352: DNA-templated transcription, initiation | 1.04E-04 |
| 16 | GO:0006094: gluconeogenesis | 1.40E-04 |
| 17 | GO:0090351: seedling development | 1.81E-04 |
| 18 | GO:0009662: etioplast organization | 1.85E-04 |
| 19 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.85E-04 |
| 20 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.85E-04 |
| 21 | GO:0015979: photosynthesis | 2.65E-04 |
| 22 | GO:0045454: cell redox homeostasis | 2.86E-04 |
| 23 | GO:0010581: regulation of starch biosynthetic process | 3.11E-04 |
| 24 | GO:2001141: regulation of RNA biosynthetic process | 4.49E-04 |
| 25 | GO:0009152: purine ribonucleotide biosynthetic process | 4.49E-04 |
| 26 | GO:0046653: tetrahydrofolate metabolic process | 4.49E-04 |
| 27 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.49E-04 |
| 28 | GO:0010731: protein glutathionylation | 4.49E-04 |
| 29 | GO:0008152: metabolic process | 4.65E-04 |
| 30 | GO:0071483: cellular response to blue light | 5.98E-04 |
| 31 | GO:0051781: positive regulation of cell division | 5.98E-04 |
| 32 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.98E-04 |
| 33 | GO:0015994: chlorophyll metabolic process | 5.98E-04 |
| 34 | GO:0006461: protein complex assembly | 7.57E-04 |
| 35 | GO:0006544: glycine metabolic process | 7.57E-04 |
| 36 | GO:0010027: thylakoid membrane organization | 8.00E-04 |
| 37 | GO:0006563: L-serine metabolic process | 9.24E-04 |
| 38 | GO:0042549: photosystem II stabilization | 9.24E-04 |
| 39 | GO:0006828: manganese ion transport | 9.24E-04 |
| 40 | GO:0010190: cytochrome b6f complex assembly | 9.24E-04 |
| 41 | GO:0009854: oxidative photosynthetic carbon pathway | 1.10E-03 |
| 42 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.10E-03 |
| 43 | GO:0009658: chloroplast organization | 1.18E-03 |
| 44 | GO:0009637: response to blue light | 1.29E-03 |
| 45 | GO:0010114: response to red light | 1.65E-03 |
| 46 | GO:0032544: plastid translation | 1.69E-03 |
| 47 | GO:0019430: removal of superoxide radicals | 1.69E-03 |
| 48 | GO:0006098: pentose-phosphate shunt | 1.91E-03 |
| 49 | GO:0010206: photosystem II repair | 1.91E-03 |
| 50 | GO:0035999: tetrahydrofolate interconversion | 2.14E-03 |
| 51 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.14E-03 |
| 52 | GO:0032259: methylation | 2.38E-03 |
| 53 | GO:0009750: response to fructose | 2.61E-03 |
| 54 | GO:0006816: calcium ion transport | 2.61E-03 |
| 55 | GO:0009773: photosynthetic electron transport in photosystem I | 2.61E-03 |
| 56 | GO:0006415: translational termination | 2.61E-03 |
| 57 | GO:0009073: aromatic amino acid family biosynthetic process | 2.61E-03 |
| 58 | GO:0043085: positive regulation of catalytic activity | 2.61E-03 |
| 59 | GO:0005983: starch catabolic process | 2.86E-03 |
| 60 | GO:0009767: photosynthetic electron transport chain | 3.12E-03 |
| 61 | GO:0005986: sucrose biosynthetic process | 3.12E-03 |
| 62 | GO:0010207: photosystem II assembly | 3.38E-03 |
| 63 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.52E-03 |
| 64 | GO:0016575: histone deacetylation | 4.52E-03 |
| 65 | GO:0009735: response to cytokinin | 4.64E-03 |
| 66 | GO:0061077: chaperone-mediated protein folding | 4.82E-03 |
| 67 | GO:0006413: translational initiation | 5.01E-03 |
| 68 | GO:0006730: one-carbon metabolic process | 5.13E-03 |
| 69 | GO:0016117: carotenoid biosynthetic process | 6.10E-03 |
| 70 | GO:0009793: embryo development ending in seed dormancy | 9.86E-03 |
| 71 | GO:0001666: response to hypoxia | 1.02E-02 |
| 72 | GO:0042128: nitrate assimilation | 1.10E-02 |
| 73 | GO:0015995: chlorophyll biosynthetic process | 1.14E-02 |
| 74 | GO:0016311: dephosphorylation | 1.18E-02 |
| 75 | GO:0018298: protein-chromophore linkage | 1.22E-02 |
| 76 | GO:0010218: response to far red light | 1.31E-02 |
| 77 | GO:0006499: N-terminal protein myristoylation | 1.31E-02 |
| 78 | GO:0009636: response to toxic substance | 1.88E-02 |
| 79 | GO:0006855: drug transmembrane transport | 1.93E-02 |
| 80 | GO:0006364: rRNA processing | 2.14E-02 |
| 81 | GO:0006096: glycolytic process | 2.41E-02 |
| 82 | GO:0048316: seed development | 2.47E-02 |
| 83 | GO:0009626: plant-type hypersensitive response | 2.52E-02 |
| 84 | GO:0009058: biosynthetic process | 3.35E-02 |
| 85 | GO:0055085: transmembrane transport | 3.44E-02 |
| 86 | GO:0042744: hydrogen peroxide catabolic process | 3.54E-02 |
| 87 | GO:0055114: oxidation-reduction process | 3.83E-02 |
| 88 | GO:0040008: regulation of growth | 3.93E-02 |
| 89 | GO:0007623: circadian rhythm | 4.06E-02 |
| 90 | GO:0009451: RNA modification | 4.13E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 4 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 9 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 10 | GO:0046570: methylthioribulose 1-phosphate dehydratase activity | 0.00E+00 |
| 11 | GO:0043874: acireductone synthase activity | 0.00E+00 |
| 12 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 13 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 14 | GO:0001053: plastid sigma factor activity | 5.79E-06 |
| 15 | GO:0016987: sigma factor activity | 5.79E-06 |
| 16 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 7.75E-05 |
| 17 | GO:0009496: plastoquinol--plastocyanin reductase activity | 7.75E-05 |
| 18 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 7.75E-05 |
| 19 | GO:0047746: chlorophyllase activity | 1.85E-04 |
| 20 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.85E-04 |
| 21 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.85E-04 |
| 22 | GO:0005528: FK506 binding | 2.27E-04 |
| 23 | GO:0004751: ribose-5-phosphate isomerase activity | 3.11E-04 |
| 24 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 3.11E-04 |
| 25 | GO:0008864: formyltetrahydrofolate deformylase activity | 3.11E-04 |
| 26 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 3.11E-04 |
| 27 | GO:0048487: beta-tubulin binding | 4.49E-04 |
| 28 | GO:0016149: translation release factor activity, codon specific | 4.49E-04 |
| 29 | GO:0016787: hydrolase activity | 5.32E-04 |
| 30 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.36E-04 |
| 31 | GO:0004372: glycine hydroxymethyltransferase activity | 7.57E-04 |
| 32 | GO:2001070: starch binding | 9.24E-04 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 9.24E-04 |
| 34 | GO:0004721: phosphoprotein phosphatase activity | 9.33E-04 |
| 35 | GO:0008168: methyltransferase activity | 1.12E-03 |
| 36 | GO:0043022: ribosome binding | 1.48E-03 |
| 37 | GO:0004033: aldo-keto reductase (NADP) activity | 1.48E-03 |
| 38 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.69E-03 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.78E-03 |
| 40 | GO:0003747: translation release factor activity | 1.91E-03 |
| 41 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.92E-03 |
| 42 | GO:0005384: manganese ion transmembrane transporter activity | 2.14E-03 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.21E-03 |
| 44 | GO:0008047: enzyme activator activity | 2.37E-03 |
| 45 | GO:0015386: potassium:proton antiporter activity | 2.61E-03 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.12E-03 |
| 47 | GO:0015095: magnesium ion transmembrane transporter activity | 3.12E-03 |
| 48 | GO:0031072: heat shock protein binding | 3.12E-03 |
| 49 | GO:0008266: poly(U) RNA binding | 3.38E-03 |
| 50 | GO:0019843: rRNA binding | 3.90E-03 |
| 51 | GO:0031409: pigment binding | 3.94E-03 |
| 52 | GO:0004407: histone deacetylase activity | 4.23E-03 |
| 53 | GO:0015079: potassium ion transmembrane transporter activity | 4.52E-03 |
| 54 | GO:0004176: ATP-dependent peptidase activity | 4.82E-03 |
| 55 | GO:0003743: translation initiation factor activity | 6.27E-03 |
| 56 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 6.82E-03 |
| 57 | GO:0004791: thioredoxin-disulfide reductase activity | 7.13E-03 |
| 58 | GO:0000287: magnesium ion binding | 8.15E-03 |
| 59 | GO:0008237: metallopeptidase activity | 9.36E-03 |
| 60 | GO:0016168: chlorophyll binding | 1.06E-02 |
| 61 | GO:0008236: serine-type peptidase activity | 1.18E-02 |
| 62 | GO:0015238: drug transmembrane transporter activity | 1.27E-02 |
| 63 | GO:0004222: metalloendopeptidase activity | 1.31E-02 |
| 64 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.36E-02 |
| 65 | GO:0009055: electron carrier activity | 1.64E-02 |
| 66 | GO:0004364: glutathione transferase activity | 1.68E-02 |
| 67 | GO:0043621: protein self-association | 1.83E-02 |
| 68 | GO:0051082: unfolded protein binding | 2.75E-02 |
| 69 | GO:0004252: serine-type endopeptidase activity | 3.48E-02 |
| 70 | GO:0030170: pyridoxal phosphate binding | 3.48E-02 |
| 71 | GO:0015297: antiporter activity | 3.93E-02 |
| 72 | GO:0005525: GTP binding | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.26E-38 |
| 2 | GO:0009941: chloroplast envelope | 9.56E-15 |
| 3 | GO:0009570: chloroplast stroma | 2.75E-11 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 6.34E-11 |
| 5 | GO:0009534: chloroplast thylakoid | 3.23E-10 |
| 6 | GO:0031969: chloroplast membrane | 1.34E-09 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.58E-06 |
| 8 | GO:0031977: thylakoid lumen | 5.10E-06 |
| 9 | GO:0009579: thylakoid | 2.64E-05 |
| 10 | GO:0009523: photosystem II | 5.25E-04 |
| 11 | GO:0009512: cytochrome b6f complex | 7.57E-04 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.29E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.91E-03 |
| 14 | GO:0000312: plastid small ribosomal subunit | 3.38E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 3.38E-03 |
| 16 | GO:0030076: light-harvesting complex | 3.66E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 4.52E-03 |
| 18 | GO:0042651: thylakoid membrane | 4.52E-03 |
| 19 | GO:0005759: mitochondrial matrix | 4.89E-03 |
| 20 | GO:0009522: photosystem I | 7.13E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 7.49E-03 |
| 22 | GO:0010319: stromule | 9.36E-03 |
| 23 | GO:0009295: nucleoid | 9.36E-03 |
| 24 | GO:0005840: ribosome | 1.35E-02 |
| 25 | GO:0015934: large ribosomal subunit | 1.36E-02 |
| 26 | GO:0009706: chloroplast inner membrane | 2.75E-02 |
| 27 | GO:0010287: plastoglobule | 3.11E-02 |
| 28 | GO:0022627: cytosolic small ribosomal subunit | 4.95E-02 |