Gene: AT5G28237
Gene description
TAIR ID: AT5G28237
Short description: Pyridoxal-5'-phosphate-dependent enzyme family protein
Pathogen responsiveness: NA
General responsiveness: NA
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
tryptophan biosynthetic process
GO cellular component
mitochondrion
GO molecular function
tryptophan synthase activity
Metabolic pathway
COMPLETE-ARO-ARA-PWY: superpathway of phenylalanine, tyrosine and tryptophan biosynthesis
TRPSYN-PWY: tryptophan biosynthesis
KEGG pathway
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00260: Glycine, serine and threonine metabolism
PATH:ath00400: Phenylalanine, tyrosine and tryptophan biosynthesis
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
26 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE37269 | Di2, WT, control | Di2, WT, TEV 21 d | -2.70 | 1.25E-03 |
| GSE37269 | Wt1, WT, control | Wt1, WT, TEV 21 d | -2.51 | 2.40E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 3.59 | 1.25E-03 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 5.05 | 5.00E-05 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 2.68 | 1.14E-02 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | 4.80 | 2.57E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 1.61 | 8.16E-06 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.54 | 4.43E-08 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.87 | 1.43E-06 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.19 | 1.61E-07 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 1.79 | 2.21E-06 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.86 | 2.80E-10 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 3.87 | 1.00E-10 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 5.57 | 8.25E-22 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 1.54 | 3.29E-03 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 4.80 | 1.57E-17 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 2.70 | 2.87E-07 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 5.24 | 1.66E-19 |
| GSE56094 | Col, WT, control 12 h | Col, WT, hrpA- 12 h | 1.78 | 1.07E-03 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 6.17 | 2.80E-24 |
| GSE56094 | Col, WT, control 13 h | Col, WT, hrpA- 13 h | 1.55 | 4.58E-03 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | 1.92 | 2.78E-04 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 2.36 | 8.03E-06 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.91 | 3.88E-04 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 3.77 | 1.76E-12 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 3.87 | 9.87E-13 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.