Gene: AT5G27680
     


Gene description


TAIR ID: AT5G27680

Short description: RECQ helicase SIM

Pathogen responsiveness: -3.42

General responsiveness: -4.71

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G090963  

Wheat: No orthologous gene

GO biological process


double-strand break repair via homologous recombination, DNA repair, DNA recombination, DNA duplex unwinding


GO cellular component


chromosome, cytoplasm, nucleus


GO molecular function


ATP binding, four-way junction helicase activity, DNA binding, nucleic acid binding, ATP-dependent 3'-5' DNA helicase activity, 3'-5' DNA helicase activity, ATP-dependent helicase activity, metal ion binding


Protein domain


PfamPF00271, Helicase conserved C-terminal domain
PfamPF16124, RecQ zinc-binding
PfamPF00270, DEAD/DEAH box helicase
SMARTSM00487, DEXDc
SMARTSM00490, HELICc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.