Gene: AT5G25220
Gene description
TAIR ID: AT5G25220
Short description: KNOTTED1-like homeobox gene 3
Pathogen responsiveness: -1.19
General responsiveness: -0.72
GO biological process
regulation of transcription, DNA-templated, response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus
GO cellular component
nucleus, cytosol
GO molecular function
protein binding, DNA binding, transcription factor activity, sequence-specific DNA binding
Protein domain
| Pfam | PF03789, ELK domain |
| Pfam | PF05920, Homeobox KN domain |
| Pfam | PF03791, KNOX2 domain |
| Pfam | PF03790, KNOX1 domain |
| SMART | SM01256, KNOX2 |
| SMART | SM00389, HOX |
| SMART | SM01255, KNOX1 |
| SMART | SM01188, ELK |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
The number of partners (degree) is: 26 (Top10%)
click to view PPI networkCoexpression network
Differentially expressed condition 
6 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.52 | 1.80E-04 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.61 | 8.06E-05 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -2.39 | 6.76E-04 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -2.53 | 4.00E-06 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -2.44 | 5.11E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 1.60 | 9.03E-05 |
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