Gene: AT5G24490
     

Gene description


TAIR ID: AT5G24490

Short description: 30S ribosomal protein, putative

Pathogen responsiveness: 0.85

General responsiveness: 1.37

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G347956  

Wheat: No orthologous gene

GO biological process


translation


GO cellular component


ribosome, chloroplast thylakoid, chloroplast stroma, chloroplast


GO molecular function


unkown


Protein domain


PfamPF02482, Sigma 54 modulation protein / S30EA ribosomal protein
PfamPF16321, Sigma 54 modulation/S30EA ribosomal protein C terminus

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G67300

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-2.074.82E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.978.72E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.192.82E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.262.25E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.445.76E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.601.66E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.985.85E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.905.00E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.117.20E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.722.91E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.057.36E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.754.36E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.572.63E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.508.15E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.311.51E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.601.90E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.866.13E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.143.77E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.749.78E-13
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.762.89E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.741.10E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.502.08E-11
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.721.12E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.764.57E-06
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.511.64E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.812.23E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.203.68E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.191.99E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.641.03E-11
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.297.83E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.559.74E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.693.89E-05
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.243.58E-07






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